biologia plantarum

International journal on Plant Life established by Bohumil Němec in 1959

Biologia plantarum 53:759-763, 2009 | DOI: 10.1007/s10535-009-0139-3

Different maternal genome donor to Kengyilia species inferred from chloroplast trnL-F sequences

C. Zhang1,2, X. Fan1, H. Q. Yu1, L. Zhang3, X. L. Wang3, Y. H. Zhou1,2,*
1 Triticeae Research Institute, Sichuan Agricultural University, Yaan, P.R. China
2 Key Laboratory of Crop Genetic Resources and Improvement, Sichuan Agricultural University, Yaan, P.R. China
3 College of Biology and Science, Sichuan Agricultural University, Yaan, P.R. China

To reveal the maternal donor of species in genus Kengyilia, the chloroplast trnL-F sequences of 14 Kengyilia species and several related diploid species were analyzed by using Maximum Parsimony (MP) and Bayesian Inference (BI) methods. The species in Kengyilia were clustered in different clades, which indicated that Agropyron (P) is the likely maternal genome donor to Kengyilia melanthera, K. mutica and K. thoroldiana, while the maternal donor to Kengyilia batalinii, K. nana, K. kokonorica, K. kaschgarica, K. hirsuta, K. alatavica, K. gobicola, K. zhaosuensis, K. rigidula, K. longiglumis and K. grandiglumis was St or Y Roegneria genome.

Keywords: Agropyron; cluster analysis; phylogeny; Roegneria; StYP genomes; Triticeae
Subjects: Agropyron sp.; chloroplast trnL-F sequences; dendrogram; Kengyilia sp.; polymerase chain reaction (PCR); Roegneria

Received: February 13, 2008; Accepted: July 5, 2008; Published: December 1, 2009  Show citation

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Zhang, C., Fan, X., Yu, H.Q., Zhang, L., Wang, X.L., & Zhou, Y.H. (2009). Different maternal genome donor to Kengyilia species inferred from chloroplast trnL-F sequences. Biologia plantarum, 53(4), 759-763. doi: 10.1007/s10535-009-0139-3
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    References

    1. Akaike, H.: A new look at the statistical model identification. - IEEE Trans. Automat. Contr. 19: 716-723, 1974. Go to original source...
    2. Baum, B.R., Yang, J.L., Yen, C.: Taxonomic separation of Kengyilia (Poaceae: Triticeae) in relation to nearest related Roegneria, Elymus and Agropyron based on some morphological characters. - Plant Syst. Evol. 194: 123-132, 1995. Go to original source...
    3. Cai, L.B., Zhi, L.: A taxonomical study on the genus Kengyilia Yen et J. L. Yang. - Acta phytotaxon. sin. 37: 451-467, 1999.
    4. Das, M., Bhattacharya, S., Basak, J., Pal, A.: Phylogenetic relationships among the bamboo species as revealed by morphological characters and polymorphism analyses. - Boil. Plant. 51: 667-672, 2007. Go to original source...
    5. Dewey, D.R.: The genome system of classification as a guide to intergeneric hybridization with the perennial Triticeae. - In: Gustafson, J.P. (ed.): Gene Manipulation in Plant Improvement. Pp. 209-280. Plenum Press, New York 1984. Go to original source...
    6. Doyle, J.J., Doyle, J.L.: Isolation of plant DNA from fresh tissue. - Focus 12: 13-15, 1990.
    7. Hsiao, C., Chatterton, N.J., Asay, K.H., Jensen, K.B.: Phylogenetic relationships of the monogenomic species of the wheat tribe, Triticeae (Poaceae), inferred from nuclear rDNA (internal transcribed spacer) sequences. - Genome 38: 211-223, 1995. Go to original source...
    8. Huelsenbeck, J.P., Ronquist, F.R.: MrBayes: Bayesian inference of phylogenetic trees. - Bioinformatics 17: 754-755, 2001. Go to original source...
    9. Jensen, K.B.: Cytology and taxonomy of Elymus kengii, E. grandiglumis, and E. batalinii (Poaceae: Triticeae). - Genome 33: 668-673, 1990. Go to original source...
    10. Jensen, K.B.: Genome analysis of Eurasisan Elymus thoroldianus, E. melantherus, and E. kokonoricus (Poaceae: Triticeae). - Int. J. Plant Sci. 157: 136-141, 1996. Go to original source...
    11. Jones, T.A., Redinbaugh, M.G., Zhang, Y.: The western wheatgrass chloroplast genome originates in Pseudoroegneria. - Crop Sci. 40: 43-47, 2000. Go to original source...
    12. Liu, Q.L., Ge, S., Tang, H.B., Zhang, X.L., Zhu, G.F., Lu, B.R.: Phylogenetic relationships in Elymus (Poaceae: Triticeae) based on the nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences. - New Phytol. 170: 411-420, 2006. Go to original source...
    13. Lu, B.R., Salomon, B., Von Bothmer, R.: Cytogenetic studies of progeny from the intergeneric crosses Elymus × Hordeum and Elymus × Secale. - Genome 33: 425-432, 1990. Go to original source...
    14. Mason-Gamer, R.J., Orme, N.L., Anderson, C.M.: Phylogenetic analysis of North American Elymus and the monogenomic Triticeae (Poaceae) using three chloroplast DNA data sets. - Genome 45: 991-1002, 2002. Go to original source...
    15. Nylander, J.A.A.: MrModeltest 2.0. Program distributed by the author. - Evol. Biol. Cent. Uppsala University, Uppsala 2004.
    16. Redinbaugh, M.G., Jones, T.A., Zhang, Y.: Ubiquity of the St chloroplast genome in St-containing Triticeae polyploids. - Genome 43: 846-852, 2000. Go to original source...
    17. Swofford, D.L.: PAUP*: Phylogenetic analysis using parsimony (and other method) Version 4.0b10. - Sinauer Associates, Sunderland 2003.
    18. Taberlet, P., Gielly, L., Pautou, G., Bouvet, J.: Universal primers for amplification of three non-coding regions of chloroplast DNA. - Plant mol. Biol. 17: 1105-1109, 1991. Go to original source...
    19. Wang, R.R.-C., Von Bothmer, R., Dvorák, J., Fedak, G., Linde-Laursen, I., Muramatsu, M.: Genome symbols in the Triticeae (Poaceae). - In: Wang, R.R.-C., Jensen, K.B., Jaussi, C. (ed.): Proc. 2nd Int. Triticeae Symp. Pp. 29-34. Utah State University, Logan 1994.
    20. Wurdack, K.J., Hoffmann, P., Chase, M.W.: Molecular phylogenetic analysis of uniovulate Euphorbiaceae (Euphorbiaceae sensu stricto) using plastid rbcL and trnL-F DNA sequences. - Amer. J. Bot. 92: 1397-1420, 2005. Go to original source...
    21. Yang, R.W., Zhou, Y.H., Ding, C.B., Zheng, Y.L., Zhang, L.: Relationships among Leymus species assessed by RAPD markers. - Biol. Plant. 52: 117-120, 2008. Go to original source...
    22. Yen, C., Yang, J.L.: Kengyilia gobicola, a new taxon from west China. - Can. J. Bot. 68: 1894-1897, 1990. Go to original source...
    23. Yen, C., Yang, J.L., Baum, B.R.: Biosystematics of Triticeae (Vol. 3). - Chinese Agriculture Press, Beijing 2006.
    24. Zeng, J., Zhang, L., Fan, X., Zhang, H.Q., Yang, R.W., Zhou, Y.H.: Phylogenetic analysis of Kengyilia species based on nuclear ribosomal DNA internal transcribed spacer sequences. - Biol. Plant. 52: 231-236, 2008. Go to original source...
    25. Zhang, L., Zheng, Y.L., Wei, Y.M., Liu, S.G., Zhou, Y.H.: The genetic diversity and similarities among Kengyilia species based on random amplified microsatellite polymorphism. - Genet. Resour. Crop Evol. 52: 1011-1017, 2005. Go to original source...
    26. Zhang, X.Q., Yang, J.L., Yen, C., Zheng, Y.L., Zhou, Y.H.: Cytogenetic and systematic analysis of Kengyilia gobicola, K. zhaosuensis and K. batalinii var. nana (Poaceae). - Genet. Resour. Crop Evol. 47: 451-454, 2000. Go to original source...
    27. Zhou, Y.H.: Study on karyotypes of 5 species of Kengyilia. - Guihaia 14: 163-169, 1994.

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