biologia plantarum

International journal on Plant Life established by Bohumil Němec in 1959

Biologia plantarum 56:254-260, 2012 | DOI: 10.1007/s10535-012-0084-4

Nucleotide polymorphism pattern and multiple maternal origin in Thinopyrum intermedium inferred by trnH-psbA sequences

J. Zeng1,2, X. Fan1, L. -N. Sha1, H. -Y. Kang1, H. -Q. Zhang1, J. Liu4, X. -L. Wang4, R. -W. Yang4, Y. -H. Zhou1,3,*
1 Triticeae Research Institute, Sichuan Agricultural University, Wenjiang, Sichuan, P.R. China
2 College of Resources and Environment, Sichuan Agricultural University, Wenjiang, Sichuan, P.R. China
3 Key Laboratory of Crop Genetic Resources and Improvement, Ministry of Education, Sichuan Agricultural University, Wenjiang, Sichuan, P.R. China
4 College of Biology and Science, Sichuan Agricultural University, Yaan, Sichuan, P.R. China

Thinopyrum intermedium is an important species with potential utilization value in breeding of wheat. In this study, the non-coding intergenic region of trnH-psbA was investigated to assess the genetic diversity and infer the maternal origin within T. intermedium accessions. Eleven haplotypes were distinguished among the thirty-five accessions of T. intermedium. They showed a relatively low nucleotide diversity (π) of 0.00473 ± 0.00037 and a moderately high haplotype diversity (Hd) of 0.733 ± 0.061. In the phylogenetic analysis, all accessions of T. intermedium were positioned into two clades, which corresponded to the different diploid donors. These results suggested that there were two phylogenetically divergent maternal donors in T. intermedium.

Keywords: haplotypes; maternal donor; nucleotide diversity
Subjects: haplotypes; maternal donor; nucleotide diversity; genetic diversity; phylogenetic tree

Received: September 14, 2010; Accepted: March 7, 2011; Published: June 1, 2012  Show citation

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Zeng, J., Fan, X., Sha, L.-N., Kang, H.-Y., Zhang, H.-Q., Liu, J., ... Zhou, Y.-H. (2012). Nucleotide polymorphism pattern and multiple maternal origin in Thinopyrum intermedium inferred by trnH-psbA sequences. Biologia plantarum, 56(2), 254-260. doi: 10.1007/s10535-012-0084-4
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