The influence of genetic variation on gene expression

  1. Rohan B.H. Williams1,2,3,4,
  2. Eva K.F. Chan1,3,5,
  3. Mark J. Cowley1,4, and
  4. Peter F.R. Little1,6
  1. 1 School of Biotechnology and Biomolecular Sciences, University of New South Wales, Randwick, NSW 2052, Australia;
  2. 2 Ramaciotti Centre for Gene Function Analysis, University of New South Wales, Randwick, NSW 2052, Australia
  1. 3 These authors contributed equally to this work.

Abstract

The view that changes to the control of gene expression rather than alterations to protein sequence are central to the evolution of organisms has become something of a truism in molecular biology. In reality, the direct evidence for this is limited, and only recently have we had the ability to look more globally at how genetic variation influences gene expression, focusing upon inter-individual variation in gene expression and using microarrays to test for differences in mRNA levels. Here, we review the scope of these experimental analyses, what they are designed to tell us about genetic variation, and what are their limitations from both a technical and a conceptual viewpoint. We conclude that while we are starting to understand the impact of this class of genetic variation upon steady-state mRNA levels, we are still far from identifying the potential phenotypic and evolutionary outcomes.

Footnotes

  • 4 Present addresses: The John Curtin School of Medical Research, Australian National University, Canberra, ACT 2601, Australia;

  • 5 CSIRO Livestock Industries, Queensland Bioscience Precinct, 306 Carmody Road, St. Lucia, QLD 4067, Australia.

  • 6 Corresponding author.

    6 E-mail p.little{at}unsw.edu.au; fax 61-2-9385-1483.

  • Article is online at http://www.genome.org/cgi/doi/10.1101/gr.6981507

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