Subgraphs in random networks

S. Itzkovitz, R. Milo, N. Kashtan, G. Ziv, and U. Alon
Phys. Rev. E 68, 026127 – Published 25 August 2003
PDFExport Citation

Abstract

Understanding the subgraph distribution in random networks is important for modeling complex systems. In classic Erdős networks, which exhibit a Poissonian degree distribution, the number of appearances of a subgraph G with n nodes and g edges scales with network size as GNng. However, many natural networks have a non-Poissonian degree distribution. Here we present approximate equations for the average number of subgraphs in an ensemble of random sparse directed networks, characterized by an arbitrary degree sequence. We find scaling rules for the commonly occurring case of directed scale-free networks, in which the outgoing degree distribution scales as P(k)kγ. Considering the power exponent of the degree distribution, γ, as a control parameter, we show that random networks exhibit transitions between three regimes. In each regime, the subgraph number of appearances follows a different scaling law, GNα, where α=ng+s1 for γ<2, α=ng+s+1γ for 2<γ<γc, and α=ng for γ>γc, where s is the maximal outdegree in the subgraph, and γc=s+1. We find that certain subgraphs appear much more frequently than in Erdős networks. These results are in very good agreement with numerical simulations. This has implications for detecting network motifs, subgraphs that occur in natural networks significantly more than in their randomized counterparts.

  • Received 18 February 2003

DOI:https://doi.org/10.1103/PhysRevE.68.026127

©2003 American Physical Society

Authors & Affiliations

S. Itzkovitz1,2, R. Milo1,2, N. Kashtan2,3, G. Ziv1, and U. Alon1,2

  • 1Department of Physics of Complex Systems, Weizmann Institute of Science, Rehovot 76100, Israel
  • 2Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 76100, Israel
  • 3Department of Computer Science and Applied Mathematics, Weizmann Institute of Science, Rehovot 76100, Israel

Comments & Replies

Reply to “Comment on ‘Subgraphs in random networks’ ”

S. Itzkovitz, R. Milo, N. Kashtan, M. E. J. Newman, and U. Alon
Phys. Rev. E 70, 058102 (2004)

Comment on “Subgraphs in random networks”

Oliver D. King
Phys. Rev. E 70, 058101 (2004)

References (Subscription Required)

Click to Expand
Issue

Vol. 68, Iss. 2 — August 2003

Reuse & Permissions
Access Options
Author publication services for translation and copyediting assistance advertisement

Authorization Required


×
×

Images

×

Sign up to receive regular email alerts from Physical Review E

Log In

Cancel
×

Search


Article Lookup

Paste a citation or DOI

Enter a citation
×