Photosynthetica 2020, 58(SI):275-292 | DOI: 10.32615/ps.2019.150

Special issue in honour of Prof. Reto J. Strasser – Revisiting JIP-test: An educative review on concepts, assumptions, approximations, definitions and terminology

M. TSIMILLI-MICHAEL
3 Ath. Phylactou, Nicosia CY-1100, Cyprus

The aim of this educative review is, by revisiting the JIP-test as introduced and further elaborated and extended by Professor Reto J. Strasser and his research group, to clarify concepts, assumptions, and approximations on which it is based, as well as definitions and terms it uses, reminding that it is meant to evaluate impacts of environmental stresses -factors and/or perturbations - on the photosynthetic structure and function. It analyses how the JIP-test, based on the Theory of Energy Fluxes and adopting Duysens' concept, translates the OJIP polyphasic chlorophyll a fluorescence rise kinetics, emitted by PSII, into biophysical parameters to be compared. The interpretation of the OJIP sequential steps and in-between phases, the definitions/meanings and formulae derivations of quantum yields, probabilities, efficiencies, specific energy fluxes, inactive PSII reaction centres, and performance indexes (PIABS, PItotal) is addressed in detail. OJIP normalizations and subtractions providing semiquantitative information are also discussed.

Additional key words: apparent and functional PSII antenna size; driving forces; grouping (connectivity) probability; K-band; kinetics of P700 absorbance changes; K-step; L-band; OKJIP fluorescence rise kinetics.

Received: August 16, 2019; Accepted: November 12, 2019; Prepublished online: December 12, 2019; Published: May 28, 2020  Show citation

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TSIMILLI-MICHAEL, M. (2020). Special issue in honour of Prof. Reto J. Strasser – Revisiting JIP-test: An educative review on concepts, assumptions, approximations, definitions and terminology. Photosynthetica58(SPECIAL ISSUE), 275-292. doi: 10.32615/ps.2019.150
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References

  1. Delosme R.: [Studies on the induction of fluorescence in green algae and chloroplasts under intense illumination.] - BBA-Bioenergetics 143: 108-128, 1967. [In French with English abstract] Go to original source...
  2. Duysens L.N.M., Sweers H.E.: Mechanism of the two photo- chemical reactions in algae as studied by means of fluores-cence. - In: Japanese Society of Plant Physiologists (ed.): Studies on Microalgae and Photosynthetic Bacteria. Pp. 353-372. University of Tokyo Press, Tokyo 1963.
  3. Govindjee: Sixty-three years since Kautsky: Chlorophyll a fluorescence. - Aust. J. Plant Physiol. 22: 131-160, 1995. Go to original source...
  4. Guissé B., Srivastava A., Strasser R.J.: Effects of high tempera-ture and water stress on the polyphasic chlorophyll a fluorescence transient of potato leaves. - In: Mathis P. (ed.): Photosynthesis: From Light to Biosphere. Pp. 913-916. Kluwer Academic Publishers, Dordrecht 1995. Go to original source...
  5. Haldimann P., Strasser R.J.: Effects of anaerobiosis as probed by the polyphasic chlorophyll a fluorescence rise kinetic in pea (Pisum sativum L.). - Photosynth. Res. 62: 67-83, 1999. Go to original source...
  6. Haldimann P., Tsimilli-Michael M.: Non-photochemical quen-ching of chlorophyll a fluorescence by oxidised plasto-quinone: New evidences based on modulation of the redox state of the endogenous plastoquinone pool in broken spinach chloroplasts. - BBA-Bioenergetics 1706: 239-249, 2005. Go to original source...
  7. Kautsky H., Hirsch A.: Neue Versuche zur Kohlensäure-assimilation. - Naturwissenschaften 19: 964, 1931. [In German] Go to original source...
  8. Kitajima M., Butler W.L.: Quenching of chlorophyll fluores-cence and primary photochemistry in chloroplasts by dibro-mothymoquinone. - BBA-Bioenergetics 376: 105-115, 1975. Go to original source...
  9. Krüger G.H.J., Tsimilli-Michael M., Strasser R.J.: Light stress provokes plastic and elastic modifications in the structure and function of photosystem II in camellia leaves. - Physiol. Plantarum 101: 265-277, 1997. Go to original source...
  10. Lazár D., Nau¹ J., Matou¹ková., Fla¹arová M.: Mathematical modelling of changes in chlorophyll fluorescence induction caused by herbicides. - Pestic. Biochem. Phys. 57: 200-210, 1997. Go to original source...
  11. Neubauer C., Schreiber U.: The polyphasic rise of chlorophyll fluorescence upon onset of strong continuous illumination: 1. Saturation characteristics and partial control by the photo-system II acceptor side. - Z. Naturforsch. 42c: 1246-1254, 1987. Go to original source...
  12. Paillotin G.: Movement of excitations in the photosynthetic domains of photosystem II. - J. Theor. Biol. 58: 237-252, 1976. Go to original source...
  13. Papageorgiou G.C., Govindjee (ed.): Chlorophyll a Fluorescence: A Signature of Photosynthesis: Advances in Photosynthesis and Respiration, Vol. 19. Pp. 820. Springer, Dordrecht 2004. Go to original source...
  14. Schansker G., Srivastava A., Govindjee, Strasser R.J.: Charac-terization of 820 nm transmission signal paralleling the chlorophyll a fluorescence rise (OJIP) in pea leaves. - Funct. Plant Biol. 30: 785-796, 2003. Go to original source...
  15. Schansker G., Tóth S.Z., Holzwarth A.R., Garab G.: Chlorophyll a fluorescence: Beyond the limit of the QA model. - Photosynth. Res. 120: 43-58, 2014. Go to original source...
  16. Schansker G., Tóth S.Z., Strasser R.J.: Methylviologen and dibromothymoquinone treatments of pea leaves reveal the role of photosystem I in the Chl a fluorescence rise OJIP. - BBA-Bioenergetics 1706: 250-261, 2005. Go to original source...
  17. Srivastava A., Guissé B., Greppin H., Strasser R.J.: Regulation of antenna structure and electron transport in PS II of Pisum sativum under elevated temperature probed by the fast polyphasic chlorophyll a fluorescence transient: OKJIP. - BBA-Bioenergetics 1320: 95-106, 1997. Go to original source...
  18. Stirbet A.D., Srivastava A., Strasser R.J.: The energetic con-nectivity of PS II centers in higher plants probed in vivo by the fast fluorescence rise O-J-I-P and numerical simulations. - In: Garab G. (ed.): Photosynthesis: Mechanisms and Effects. Pp. 4317-4320. Kluwer Academic Publishers, Dordrecht 1998. Go to original source...
  19. Strasser B.J., Strasser R.J.: Measuring fast fluorescence transients to address environmental questions: The JIP-test. - In: Mathis P. (ed.): Photosynthesis: From Light to Biosphere. Pp. 977-980. Kluwer Academic Publishers, Dordrecht 1995. Go to original source...
  20. Strasser R.J.: The grouping model of plant photosynthesis. - In: Akoyunoglou G., Argyroudi-Akoyunoglou J.H. (ed.): Chloroplast Development. Pp. 513-524. Elsevier, Amsterdam 1978.
  21. Strasser R.J.: The grouping model of plant photosynthesis: heterogeneity of photosynthetic units in thylakoids. - In: Akoyunoglou G. (ed.): Photosynthesis III. Structure and Molecular Organisation of the Photosynthetic Apparatus. Pp. 727-737. Balaban International Science Services, Philadelphia 1981.
  22. Strasser R.J., Govindjee: The F0 and the O-J-I-P fluorescence rise in higher plants and algae. - In: Argyroudi-Akoyunoglou J.H. (ed.): Regulation of Chloroplast Biogenesis. Pp. 423-426. Plenum Press, New York 1992. Go to original source...
  23. Strasser R.J., Srivastava A., Govindjee: Polyphasic chlorophyll a fluorescence transient in plants and cyanobacteria. - Photochem. Photobiol. 61: 32-42, 1995. Go to original source...
  24. Strasser R.J., Srivastava A., Tsimilli-Michael M.: The fluores- cence transient as a tool to characterize and screen photosyn-thetic samples. - In: Yunus M., Pathre U., Mohanty P. (ed.): Probing Photosynthesis: Mechanism, Regulation and Adaptation. Pp. 443-480. Taylor and Francis, London 2000.
  25. Strasser R.J., Stirbet A.D.: Estimation of the energetic connectivity of PS II centres in plants using the fluorescence rise O-J-I-P. Fitting of experimental data to three different PS II models. - Math. Comput. Simulat. 56: 451-461, 2001. Go to original source...
  26. Strasser R.J., Tsimilli-Michael M.: Activity and heterogeneity of PS II probed in vivo by the chlorophyll a fluorescence rise O-(K)-J-I-P. - In: Garab G. (ed.): Photosynthesis: Mechanisms and Effects. Pp. 4321-4324. Kluwer Academic Publishers, Dordrecht 1998. Go to original source...
  27. Strasser R.J., Tsimilli-Michael M., Dangre D., Rai M.: Bio-physical phenomics reveals functional building blocks of plants systems biology: A case study for the evaluation of the impact of mycorrhization with Piriformospora indica. - In: Varma A., Oelmüller R. (ed.): Advanced Techniques in Soil Microbiology. Soil Biology. Vol. 11. Pp. 319-342. Springer-Verlag, Berlin 2007. Go to original source...
  28. Strasser R.J., Tsimilli-Michael M., Qiang S., Goltsev V.: Simul-taneous in vivo recording of prompt and delayed fluorescence and 820-nm reflection changes during drying and after rehydration of the resurrection plant Haberlea rhodopensis. -BBA-Bioenergetics 1797: 1313-1326, 2010. Go to original source...
  29. Strasser R.J., Tsimilli-Michael M., Srivastava A.: Analysis of the chlorophyll a fluorescence transient. - In: Papageorgiou G.C., Govindjee (ed.): Chlorophyll a Fluorescence: A Signature of Photosynthesis. Advances in Photosynthesis and Respiration. Pp. 321-362. Springer, Dordrecht 2004. Go to original source...
  30. Tsimilli-Michael M., Jarraud N., Strasser R.J.: Reforestation in Cyprus - in vivo and in situ assessment of mycorrhization impact on plants' vitality with the JIP-test. - In: Proceedings of the COST Action 870 Meeting 'Mycorrhiza Application in Sustainable Agriculture and Natural Systems'. Pp. 76-79. Thessaloniki, Greece 2008.
  31. Tsimilli-Michael M., Stamatakis K., Papageorgiou G.C.: Dark-to-light transition in Synechococcus sp. PCC 7942 cells studied by fluorescence kinetics assesses plastoquinone redox poise in the dark and photosystem II fluorescence component and dynamics during state 2 to state 1 transition. - Photosynth. Res. 99: 243-255, 2009. Go to original source...
  32. Tsimilli-Michael M., Strasser R.J.: Experimental resolution and theoretical complexity determine the amount of information extractable from the chlorophyll fluorescence transient OJIP. -In: Allen J.F., Gantt E., Golbeck J.H., Osmond B. (ed.): Photosynthesis. Energy from the Sun. Pp. 697-701. Springer Dordrecht 2008a. Go to original source...
  33. Tsimilli-Michael M., Strasser R.J.: In vivo assessment of stress impact on plants' vitality: applications in detecting and evaluating the beneficial role of mycorrhization on host plants. - In: Varma A. (ed.): Mycorrhiza. State of the Art, Genetics and Molecular Biology, Eco-Function, Biotechno-logy, Eco-Physiology, Structure and Systematics. 3rd edition. Pp. 679-703. Springer, Berlin-Heidelberg 2008b. Go to original source...
  34. Tsimilli-Michael M., Strasser R.J.: The energy flux theory 35 years later: Formulations and applications. - Photosynth. Res. 117: 289-320, 2013a. Go to original source...
  35. Tsimilli-Michael M., Strasser R.J.: Biophysical phenomics: Evaluation of the impact of mycorrhization with Piriformo-spora indica. - In: Varma A., Kost G., Oelmüller R. (ed.): Piriformospora indica. Sebasinales and Their Biotechno-logical Applications. Pp. 173-190. Springer-Verlag, Berlin-Heidelberg 2013b. Go to original source...
  36. Vredenberg W.J.: A three-state model for energy trapping and chlorophyll fluorescence in photosystem II incorporating radical pair recombination. - Biophys. J. 79: 26-38, 2000. Go to original source...
  37. Yusuf M.A., Kumar D., Rajwanshi R. et al.: Overexpression of γ-tocopherol methyl transferase gene in transgenic Brassica juncea plants alleviates abiotic stress: Physiological and chlorophyll a fluorescence measurements. - BBA-Bioenergetics 1797: 1428-1438, 2010. Go to original source...