Data Release
Cold-water coral microbiomes (Paramuricea placomus) from Baltimore Canyon: raw and processed data
By Christina A. Kellogg
USGS, St. Petersburg, Florida
Summary
The files in this data release are the raw and processed DNA sequence files referenced in the submitted journal article by Kellogg et. al. titled "Bacterial Community Diversity of the Deep-Sea Octocoral Paramuricea placomus." They represent a 16S rRNA gene amplicon survey of the coral's microbiome completed using Roche 454 pyrosequencing with titanium reagents. Baltimore Canyon is in the Atlantic Ocean and the samples were collected in 2012-2013. The raw data files associated with this study have also been submitted to the NCBI Sequence Read Archive under Bioproject number PRJNA297333. For more information, please see the README file.
Data
| File Name and Description | Download |
|---|---|
| README.txt Readme file explaining data |
README.txt (5 KB) |
| processed_data Zip file containing processed data files |
processed_data.zip (5.7 GB) |
raw_data |
raw_data.zip (1.63 GB) |
| paramuricea_metadata.txt Metadata in text format |
paramuricea_metadata.txt (23.8 MB) |
paramuricea_metadata.xlsx |
paramuricea_metadata.xlsx (4.7 MB) |
Figure 1. Location map.
Suggested Citation
Kellogg, C.A., 2015, Cold-water coral microbiomes (Paramuricea placomus) from Baltimore Canyon: raw and processed data: U.S. Geological Survey data release, https://doi.org/10.5066/F7HQ3WZZ.