Published July 23, 2018
| Version PS 1.68.5
Dataset
Open
Kiwifruit Genome Assembly Red5 Version PS1.68.5
Contributors
Data curators:
- Sarah Pilkington1
- Ross Crowhurst1
- Elena Hilario1
- Simona Nardozza1
- Lena Fraser1
- Yongyan Peng1
- Kularajathevan Gunaseelan1
- Robert Simpson1
- Jibran Tahir1
- Simon Deroles1
- Kerry Templeton1
- Zhiwei Luo1
- Marcus Davy1
- Canhong Cheng1
- Mark McNeilage1
- Davide Scaglione2
- Yifei Liu3
- Qiong Zhang4
- Paul Datson1
- Nihal De Silva1
- Susan Gardiner1
- Heather Bassett1
- David Chagn1
- John McCallum1
- Helge Dzierzon1
- Cecilia Deng1
- Yen Wang1
- Lorna Barron1
- Kelvina Manako1
- Judith Bowen1
- Toshi Foster1
- Zoe Erridge1
- Heather Tiffin1
- Chethi Waite1
- Kevin Davies1
- Ella Grierson1
- William Laing1
- Rebecca Kirk1
- Xiuyin Chen5
- Marion Wood1
- Mirco Montefiori1
- David Brummell1
- Kathy Schwinn1
- Andrew Catanach1
- Christina Fullerton1
- Dawei Li4
- Sathiyamoorthy Meiyalaghan1
- Niels Nieuwenhuizen1
- Nicola Read5
- Roneel Prakash1
- Don Hunter1
- Huaibi Zhang4
- Marian McKenzie1
- Mareike bel1
- Alastair Harris5
- Andrew Allan1
- Andrew Gleave1
- Angela Chen5
- Bart Janssen1
- Blue Plunkett1
- Charles Dwamena1
- Charlotte Voogd1
- Davin Leif1
- Declan Lafferty5
- Edwige Souleyre1
- Erika Gasic1
- Francesco Gambi1
- Jenny Hanley5
- Jia Yao1
- Joey Cheung5
- Karine David5
- Ben Warren1
- Ken Marsh1
- Kimberley Snowden1
- Kui Wang1
- Lara Brian1
- Marcela Sanchez1
- Mindy Wang1
- Nadeesha Ileperuma1
- Nikolai Macnee1
- Robert Campin1
- Peter McAtee1
- Revel Drummond1
- Richard Espley1
- Hilary Ireland1
- Rongmei Wu1
- Ross Atkinson1
- Sakuntala Karunairetnam1
- Sean Bulley1
- Shayhan Chunkath5
- Zac Hanley5
- Roy Storey1
- Amali Thrimawithana1
- Susan Thomson1
- Charles David5
- Raffaele Testolin6
- Hongwen Huang4
- Roger Hellens1
- Robert Schaffer1
- 1. Plant and Food Research
- 2. IGA Technology Services, Parco Scientifico e Tecnologico, Udine, Italy
- 3. South China Botanic Gardens, Chinese Academy of Sciences, Guangzhou, China
- 4. Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan, China
- 5. School of Biological Sciences, University of Auckland, Auckland, New Zealand
- 6. Department of Agricultural and Environmental Sciences, University of Udine, Udine, Italy
Description
Draft assembly pseudomolecules plus repeat and gene model annotation files for kiwifruit Actinidia chinensis var. chinensis 'Red5'.
Notes
Pre-publication working draft of assembly published in BMC Genomics 2018 19:257 . Chromosome 30 includes scaffolds not placed on genetic maps
Files
Files
(654.9 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:43ef4698b0c8701f47d4bf0c649f810d
|
19.8 MB | Download |
|
md5:454153387ff76ce763247873c79d466c
|
524.1 kB | Download |
|
md5:b34c4495d6629e90e2530ec998741d98
|
19.7 MB | Download |
|
md5:05c946e5afc0c81174092e3388734d8e
|
558.2 kB | Download |
|
md5:6ea9562d72e63bf609e67f59e9f5dd4d
|
15.3 MB | Download |
|
md5:07f9875a1c4c8ca6006e609fc3c59c7c
|
377.9 kB | Download |
|
md5:e62d73db6f4f0feddfec42ff77b63774
|
19.2 MB | Download |
|
md5:32ab0922eac0fbf34d8998c28d8a1512
|
525.2 kB | Download |
|
md5:45e252223cca1ac9308def84dcb609da
|
18.7 MB | Download |
|
md5:fd01128d0b6b3b7bb4d6cf9fea9a4af0
|
412.4 kB | Download |
|
md5:575afa9ee78261a309eb6695e41337eb
|
17.5 MB | Download |
|
md5:bf4b358d7d299709b1c3896c41c2470e
|
457.9 kB | Download |
|
md5:f6d988a3c1414a5b45ae01c6514c7732
|
17.3 MB | Download |
|
md5:84b8d7bde7308675c084c030e661f833
|
450.2 kB | Download |
|
md5:de183beeb90b261038f967a2e7b872de
|
23.5 MB | Download |
|
md5:710ab374cb38d31a09654c5c1c29278b
|
698.8 kB | Download |
|
md5:56181e06af897ec242eebcd89e110f20
|
17.3 MB | Download |
|
md5:4abfd714a814dd6f4e6920dd1f1a4cf4
|
477.5 kB | Download |
|
md5:a54bb6924ef1e5e692b0c2f3d894d9d1
|
20.7 MB | Download |
|
md5:12372ce70253a9415f022ff063232a48
|
563.3 kB | Download |
|
md5:29c4b4af7e2c6de2d6e61d29a94214b7
|
23.9 MB | Download |
|
md5:003dc87b212524baff9e240351e342b2
|
667.9 kB | Download |
|
md5:ab43aa2f25b4aaa7ee7a2cf3f3748c38
|
16.1 MB | Download |
|
md5:647eb66bc775793f4fbe58982af76223
|
409.6 kB | Download |
|
md5:906a6f1f8cbb41b78ae64650b5e8ff8d
|
18.1 MB | Download |
|
md5:94ad7cc02a02b42e4819ba508ae0e2ce
|
437.1 kB | Download |
|
md5:3a3150b9dd901aa7e4aebba5d7f5af51
|
17.3 MB | Download |
|
md5:3d0a5cf2672096fde9bcfe0f490bfb41
|
456.9 kB | Download |
|
md5:c68dd3657d37bdb7be22f44b0174d050
|
16.8 MB | Download |
|
md5:2c56afbb2821e3c4e682fb7a2019a4d0
|
464.1 kB | Download |
|
md5:a19d3d31a26094e564e14e434fc8b394
|
20.2 MB | Download |
|
md5:ebc5de382c10da9d67209aa3e1841d4a
|
452.8 kB | Download |
|
md5:ae36edf873295c02d675b5c4f686ad2a
|
17.6 MB | Download |
|
md5:dd97d324398cdf61745f72217f33180d
|
431.2 kB | Download |
|
md5:0b0f8c07c7e33b825c04f1e11a76b842
|
19.9 MB | Download |
|
md5:31b5b2933c944d1eceefaef1b791bb28
|
567.7 kB | Download |
|
md5:30f212065ccfb9b9e9ab1c3c12311eac
|
20.4 MB | Download |
|
md5:8503a02e370a8c3c95c5809f966e6c67
|
531.8 kB | Download |
|
md5:58e80e6ad11fcd5f94870eeb5a513681
|
21.6 MB | Download |
|
md5:23b938d8aa81e1f7c56bdcca04cc78a9
|
632.1 kB | Download |
|
md5:15e0016f02770eebb8c4ef31e5c2aec5
|
16.2 MB | Download |
|
md5:a9548a71917bc78367f6dfbe14b8bee3
|
412.4 kB | Download |
|
md5:993a91b4fdfac3ad1bae9704d4fee1c0
|
17.8 MB | Download |
|
md5:31844ece1eea7972bb76b6903745fd1f
|
492.2 kB | Download |
|
md5:837c4fd90eb0dfe3d06d325b099a0249
|
24.0 MB | Download |
|
md5:0e932d9f9582b57611a1dd064af77088
|
564.4 kB | Download |
|
md5:a57f2ab4ced97a9d8fac92b91f190ded
|
12.4 MB | Download |
|
md5:8a0c15008ca4e137144ea62fb0ee0aee
|
353.2 kB | Download |
|
md5:100ca0a8c77f44525d029c4b77d94386
|
13.1 MB | Download |
|
md5:b6bf7ee9a20583c0145083b938a8f9ab
|
334.4 kB | Download |
|
md5:0ee9c2bf797ae37f01e2fdeecfca3829
|
18.5 MB | Download |
|
md5:9dd3cd871d348f7ea3d13621f4ebba35
|
513.4 kB | Download |
|
md5:4c49e8a6bb74f640fba9c1c68bc6d321
|
17.6 MB | Download |
|
md5:128795ccd2131c1d92cd4018becddefa
|
437.1 kB | Download |
|
md5:a3e82e9be27752d5a8f93cd98365a69a
|
20.6 MB | Download |
|
md5:f9ce851f6d86ef8cccb068d64e041010
|
548.2 kB | Download |
|
md5:df07a68a29ff9ecf11a88f44d13ac0b8
|
25.7 MB | Download |
|
md5:c788a41f84cdc436dd44bd0668fa37f6
|
687.7 kB | Download |
|
md5:a73a87c950b97a64460f5d3a383c550f
|
16.7 MB | Download |
|
md5:e274cef95d2dd769277179d9963935b6
|
403.8 kB | Download |
|
md5:3916e2fc2c86b64224dc5809aae87b20
|
76.4 MB | Download |
Additional details
References
- Pilkington, S. M., Crowhurst, R., Hilario, E., Nardozza, S., Fraser, L., Peng, Y., ... & Templeton, K. (2018). A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants. BMC genomics, 19(1), 257.. DOI https://doi.org/10.1186/s12864-018-4656-3
- Crowhurst, R., Liu, Y., & Scaglione, D. (2016). The Kiwifruit Genome. In The Kiwifruit Genome (pp. 101-114). Springer, Cham. DOI https://doi.org/10.1007/978-3-319-32274-2_8