Published July 30, 2019
| Version 1.6.0
Software
Open
nextgenusfs/funannotate: funannotate v1.6.0
Description
- support for antiSMASH v5.0 output #292 #299
- add
snap
andglimmerhmm
request from #240. BUSCO is now run by default infunannotate predict
if there is no PASA data -- BUSCO results used to trainglimmerhmm
andsnap
- improved Phobius results parsing #259
- multi-threaded
funannotate clean
, thanks to @bogemad - fix database links #300
- multi-threaded
hisat2-build
#303 - write all output files directly from
tbl
format -- fix bug associated with multi-transcript parsing from GenBank files - bug fix for protein2genome exonerate mapping
- bug fixes for
funannotate train
andfunannotate update
- added
--min_coverage
option to trinity workflow and set default to 5 - bug fixes for
codingquarry
predictions (RNA-seq only) - improved error message for repeatmodeler/masker #298
- bug fix for remote searches
- bug fix for parsing input folders in annotate #302
- updated conda install docs --> which seems futile to keep this current....
Files
nextgenusfs/funannotate-1.6.0.zip
Files
(8.9 MB)
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Additional details
Related works
- Is supplement to
- https://github.com/nextgenusfs/funannotate/tree/1.6.0 (URL)