Published September 29, 2022 | Version v1
Dataset Open

ProgressiveMauve alignment of Xanthomonas oryzae pv. oryzae PXO35 assembly variants

Creators

  • 1. Martin Luther University Halle-Wittenberg
  • 2. Leibniz Universität Hannover
  • 3. Friedrich Schiller University Jena
  • 4. Univ Montpellier
  • 5. New England Biolabs Inc.
  • 6. Robert Koch Institute

Description

Archive containing the alignment of eight assembly variants using different assembly programs and sequencing technologies. This alignment has been produced by the progressiveMauve algorithm (https://doi.org/10.1371/journal.pone.0011147). The main alignment file is "PXO35_assembly_comparison", which can be opened and viewed interactively using the mauve program (https://darlinglab.org/mauve/download.html).

Notes

This work was supported by grants from the Deutsche Forschungsgemeinschaft (http://www.dfg.de) (BO 1496/8-2 to JB, GR 4587/1-2 to JG and FZT 118/2 to SK and MM). Work in RK's laboratory was supported by a grant from the French Agence Nationale de la Recherche (ANR-2010- BLAN-1723). MM and SK were supported by the Ministry for Economics, Sciences and Digital Society of Thuringia (TMWWDG), under the framework of the Landesprogramm ProDigital (DigLeben-5575/10-9).

Files

interactiveMauvePXO35_Assemblies.zip

Files (171.6 MB)

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