LauraBotta/curesurvTools: v1.0
Creators
- 1. Fondazione IRCCS Istituto Nazionale dei tumori di Milano
- 2. Registre Bourguignon des Cancers Digestifs, Dijon-Bourgogne University Hospital, Dijon, France
- 3. Editorial Board, Epidemiologia e Prevenzione, Milan, Italy
- 4. UMR 1231, EPICAD team, INSERM, Université Bourgogne-Franche-Comté, Dijon, France
Description
Codes and examples for the application of the corrected mixture cure model in STATA and R.
In this repository you can find two folders.
One named “curesurv_R” which includes:
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A pdf file entitled "How to estimate a new mixture cure model for increased risk of non-cancer death" that illustrates the data analysis using the conventional and new models presented in the article and guides the user through the installation part of the R package. This can be accessed online through: https://rpubs.com/Goungounga/994890
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A folder called “curesurv” includes the R package curesurv in tar.gz version. This package allows to fit a variety of cure models using the excess-risk modelling methodology, including the new mixed cure model.
The second, called 'curesurv_Stata', comprises:
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The do file named “script_ml_CorrectedMixtureCureModel “ that includes the programmes to define the Maximum likelihood to estimate model parameters using individual and grouped data. An example using the following two .dta files is also included in this script.
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A .dta file named “individual” that includes simulated individual data.
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A .dta file named “'lifetable” that includes the simulated lifetable of a general population.
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A .dta file named "extcuremod_estimates" that includes the results of the example for final comparison.
Full Changelog: https://github.com/LauraBotta/curesurvTools/commits/v1.0
Files
LauraBotta/curesurvTools-v1.0.zip
Files
(1.4 MB)
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md5:7edcf46474c883b0e2b7a75a50974eed
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Additional details
Related works
- Is supplement to
- https://github.com/LauraBotta/curesurvTools/tree/v1.0 (URL)