data.tar (987.01 MB)
E. coli 1D2 nanopore sequencing reads
Set of 1D2 E. coli reads used for testing PoreOver (https://github.com/jordisr/poreover) in "Pair consensus decoding improves accuracy of neural network basecallers for nanopore sequencing" Silvestre-Ryan and Holmes (2020).
Files:
- ecoli-74e17dd3: E. coli reference genome
- read_pairs.txt: list of 1D2 read pairs
- reads/: directory of FAST5 files
This data was originally generated by Oxford Nanopore Technologies and is shared with permission. Sequencing was done with R9.4 pore chemistry in October 2018 and accuracy may not be representative of the current platform.
