Dataset S1. Genomic windows identified as putative introgressed regions (pIRs) across nine trios.
Dataset S2. Gene functional annotation for the genome reference of Vitis arizonica b40-14 version 1.
Dataset S3. Significant SNPs (FDR adjusted p < 0.05) from GWAS with bacterial levels of the causative agent of Pierce’s Disease.
Dataset S4. Significant SNPs (Bayes’ Factor > 10) from GEA with the top three bioclimatic variables per species.
Dataset S5. Subset of significant SNPs (Bayes’ Factor > 10) from GEA with the top three bioclimatic variables in the P2 species that were in putative introgressed regions (pIRs).
Funding
RESEARCH-PGR: Phenotypic and Genomic Diversity of North American Vitis