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Article

Sahlep (Dactylorhiza osmanica): Phytochemical Analyses by LC-HRMS, Molecular Docking, Antioxidant Activity, and Enzyme Inhibition Profiles

1
Department of Pharmacy Services, Vocational School of Health Services, Van Yuzuncu Yil University, Van 65080, Turkey
2
Department Chemistry, Faculty of Sciences, Gebze Technical University, Kocaeli 41400, Turkey
3
Department of Zoology, College of Science, King Saud University, Riyadh 11362, Saudi Arabia
4
Department of Chemistry, Faculty of Science, Ataturk University, Erzurum 25240, Turkey
*
Author to whom correspondence should be addressed.
Submission received: 2 September 2022 / Revised: 3 October 2022 / Accepted: 11 October 2022 / Published: 14 October 2022

Abstract

:
Studies have shown an inverse correlation among age-related illnesses like coronary heart disease and cancer and intake of fruit and vegetable. Given the probable health benefits of natural antioxidants from plants, research on them has increased. Dactylorhiza osmanica is consumed as a food and traditional medicine plant in some regions of Turkey, so evaluation of the biological ability of this species is important. In this study, the amount of phenolic content (LC-HRMS), antioxidant activities and enzyme inhibitory properties of an endemic plant, D. osmanica, were investigated. The antioxidant capacities of an ethanol extract of D. osmanica aerial parts (EDOA) and roots (EDOR) were evaluated with various antioxidant methods. Additionally, the enzyme inhibitory effects of EDOA and EDOR were examined against acetylcholinesterase (AChE), α-glycosidase, and α-amylase enzymes, which are associated with common and global Alzheimer’s disease and diabetes mellitus. The IC50 values of EDOA against the enzymes were found to be 1.809, 1.098, and 0.726 mg/mL, respectively; and the IC50 values of EDOR against the enzymes were found to be 2.466, 0.442, and 0.415 mg/mL, respectively. Additionally, LC-HRMS analyses revealed p-Coumaric acid as the most plentiful phenolic in both EDOA (541.49 mg/g) and EDOR (559.22 mg/g). Furthermore, the molecular docking interaction of p-coumaric acid, quercitrin, and vanillic acid, which are the most plentiful phenolic compounds in the extracts, with AChE, α-glucosidase, and α-amylase, were evaluated using AutoDock Vina software. The rich phenolic content and the effective antioxidant ability and enzyme inhibition potentials of EDOA and EDOR may support the plant’s widespread food and traditional medicinal uses.

1. Introduction

The Orchidaceae family is one of the richest flowering plant groups in the world, and there are 24 genera and 170 taxa in Turkey [1]. Orchids have a very high economic value. Although it is known especially as an ornamental plant, many orchid species are commonly used in the foods and pharmacy industry. The vanilla flavor obtained from orchids is frequently traded [2]. Orchid species are used for treatment of Alzheimer’s and Parkinson’s diseases (AD and PD), anxiety, depression, cancer, chest pain, tuberculosis, intestinal disorders, dysentery, diarrhea, cough, cold, anemia, and are also used as an aphrodisiac in adults [2,3,4]. It has been reported that these medicinal properties are due to secondary compounds such as polyphenolic compounds, ascorbic acid, indole alkaloids, and saponins [4]. It has also been determined that orchid roots have many compounds such as polyphenols and glucomannan, which have strong antioxidant properties [3]. The flour made from orchid roots, in Mediterranean countries and Turkey, is traditionally used as a drink called “salep” or “sahlep” [2,5]. Glucomannan polysaccharide, which is composed of mannose and glucose, is the main component in orchid flour [2]. In addition to hot drinks, sahlep is widely used in bakery foods, as an additive for ice cream, and in confectionery and pharmaceuticals [4]. In Turkey, sahlep is prepared from approximately 120 orchid taxa representing genera such as Dactylorhiza, Orchis, and Ophrys [2]. The genus Dactylorhiza, which belongs to the Orchidaceae family, occurs in Europe, the Mediterranean, and Asia, and it has been determined that there are 13 species in Turkey. Dactylorhiza osmanica (D. osmanica), which is one of the endemic Orchidaceae species that is the subject of our study, is used in Turkey for strengthening, treating wounds and abscesses, relieving mental fatigue, as an anti-inflammatory [1].
Oxidation is essential to fuel the biological processes of living organisms. However, it can cause uncontrolled production of oxygen-induced free radicals [6,7,8]. The balance between reactive oxygen species (ROS) formation and antioxidants is controlled by the antioxidant defense system [6]. However, exposure to UV light, smoking and other environmental pollutants, and cell metabolism disorders also increase the body’s free radical level, becoming a defect in the cell’s redox balance [9]. Increased ROS attacks membranes, enzymes, lipids, carbohydrates, proteins, and DNA, and causes various disorders and diseases [6]. There are studies confirming the role of free radicals and ROS in diseases such as cancer, atherosclerosis, brain dysfunction, and cardiovascular diseases [10]. Antioxidants, which consist of certain enzymes, vitamins such as E or β-carotene, and organic substances such as phenols and amines, can stop radical chain reactions and counter the harmful effects of oxidation in tissues [11]. Synthetic antioxidants are often used currently [9]. Recently, synthetic antioxidants have been suspected to have carcinogenic effects and therefore their use has been limited, so there is significant attention given to the discovery of natural antioxidants that can be used as substitutes [6,12].
Plants constitute an important source of active compounds and thus can show strong antioxidant effects. The fact that plants contain these active compounds that create physiological effects in the human body adds to their medicinal value [13]. Medicinal plants are recognized as a resource for the prevention and treatment of many diseases [14,15]. Plant phytochemicals attract the attention of researchers in the therapy of some diseases such as metabolic inflammation and cancer. Some phytochemicals are the subject of cancer therapy research. Many phenolics and flavonoids are frequently used in the design and development of drug processes. Studies have determined that phenolic compounds in plants can reduce or prevent oxidative damage from free radicals [16]. Therefore, the commercial importance of plants containing these secondary compounds is increasing [17,18].
In this study, the antioxidant capacities of evaporated ethyl alcohol extract of aerial parts and roots of D. osmanica were determined by several different in vitro antioxidant activity methods: Fe3+-TPTZ reducing capacity (FRAP); ferric ion (Fe3+) reducing capacity; cupric ion (Cu2+) reducing capacity (CUPRAC); DPPH and ABTS radical removing methods; and Fe2+ chelating activity. Furthermore, the amount of phenolic content determined by LC-HRMS analysis was also investigated. The enzyme inhibition ability of the extracts was determined against AChE, α-glycosidase, and α-amylase enzymes. Additionally, the molecular docking interaction of the most plentiful phenolics in the extracts with AChE, α-glycosidase enzymes and α-amylase, were determined using the statistical program of IBM SPSS Statistics 20.

2. Results

Numerous antioxidant activity assessments are used for preventing oxidation processes. One of the most important of these is the DPPH radical removal method. DPPH scavenging abilities of EDOA and EDOR and standards were investigated. The IC50 values for EDOA and EDOR and standard antioxidants were as follows: Ascorbic acid (16.12 ± 0.003, r2: 0.9566) > α-Tocopherol (23.10 ± 0.032, r2: 0.9825) > BHT (31.50 ± 0.011, r2: 0.9754) > EDOA (86.63 ± 0.010, r2: 0.9894) > EDOR (115.50 ± 0.011, r2: 0.9794) (Table 1 and Figure 1a) (p < 0.001). The lower IC50 suggests an effective radical scavenging effect [19]. The IC50 values of ABTS•+ scavenging for EDOA and EDOR and standard antioxidants were determined in following order: EDOA (10.19 ± 0.002, r2: 0.9819) > α-Tocopherol (15.400 ± 0.003, r2: 0.9866) > EDOR (19.80 ± 0.013, r2: 0.9564) > Ascorbic acid (23.10 ± 0.001, r2: 0.9998) > BHT (26.65 ± 0.008, r2: 0.9717) (Table 1 and Figure 1b).
Additionally, EDOA and EDOR have an efficient ABTS•+ scavenging activity. A statistically significant difference was found between DPPH and ABTS•+ scavenging activity results measured in a concentration-based way (10–30 μg/mL) (p < 0.001) (Table 1). In the literature, no publication was found in which ABTS•+ scavenging activity was measured in D. osmanica extracts. This study provides a reference. In a study conducted with Dactylorhiza hatagirea tuber extract, ABTS•+ scavenging activity was found to be 1.06 ± 0.008 mM/g [4]. In another study, ethanol extracts of Dactylorhiza romana roots were investigated and the ABTS test IC50 was found to be 0.64 ± 0.005 mg/mL [20]. For ABTS•+ scavenging activity, the IC50 amounts obtained from this study and studies of the different species mentioned above were found to be quite effective.
Metal chelating activity of EDOA and EDOR and standard antioxidant compounds was evaluated and the IC50s was determined (Table 1 and Figure 1b). EDOA was realized to have the most effective chelating activity (p < 0.001, Table 1). The IC50s for the metal chelating ability of extracts and standard compounds was determined in the following order: EDOA (5.63 ± 0.033, r2: 0.9294) > BHT (14.75 ± 0.056, r2: 0.9646) > EDOR (46.20 ± 0.015, r2: 0.9000) > Ascorbic acid (99.0 ± 0.036, r2: 0.9985) > α-Tocopherol (330.0 ± 0.017, r2: 0.9109) (Table 1 and Figure 1c). The results indicate that EDOA and EDOR have very strong metal chelating activity. The literature search revealed no publications about Fe2+ chelating activity measured in D. osmanica extracts, so this study is the first.
In the Fe3+ reducing ability assay, the concentrations of standards, EDOA, and EDOR were increased steadily. The reducing ability of EDOA, EDOR, and standard antioxidants (120 µg/mL) were as follows: Ascorbic acid (1.52 ± 0.028, r2: 0.9970) > BHT (1.27 ± 0.005, r2: 0.9880) > α-tocopherol (0.99 ± 0.007, r2: 0.9942) > EDOA (0.99 ± 0.003, r2: 0.9553) > EDOA (0.83 ± 0.031, r2: 0.9423) (Table 2 and Figure 2a).
The CUPRAC of EDOA, EDOR, and positive controls were measured depending on the concentration (10–30 μg/mL) and were as follows: BHT (1.56 ± 0.089, r2: 0.9978) > Ascorbic acid (1.07 ± 0.007, r2: 0.9722 > α-Tocopherol (0.79 ± 0.061, r2: 0.9986) > EDOR (0.72 ± 0.022, r2: 0.9707) > EDOA (0.67 ± 0.019, r2: 0.9747) (Table 2 and Figure 2b). EDOA and EDOR demonstrated effective CUPRAC reduction ability (p < 0.001) (Table 2). The FRAP results of EDOA, EDOR, and standard antioxidants (150 µg/mL) decreased in the following order: Ascorbic acid (1.62 ± 0.015, r2: 0.9930) > BHT (0.91 ± 0.006, r2: 0.9874) > α-tocopherol (0.76 ± 0.075, r2: 0.9867) > EDOA (0.52 ± 0.005, r2: 0.9722) > EDOR (0.45 ± 0.006, r2: 0.9673) (Table 2 and Figure 2c).
The content of total phenolic in EDOA and EDOR was found to be 12.73 ± 1.29 and 9.09 ± 0.64 μg GAE, respectively. Additionally, the total content of flavonoids in EDOA and EDOR was found to be 17.54 ± 1.85 and 3.28 ± 0.12 μg QE, respectively (Table 3). It shows that a positive correlation was found between total phenolic and flavonoids in EDOA, EDOR, and antioxidant activities. In one study, the methanol extract of aerial parts of D. osmanica was investigated and the total phenol content was found to be 20.6 ± 0.379 μg GAE [1].
In the present study, the phenolic quantity of EDOA and EDOR was evaluated by LC-HRMS analysis. For this purpose, thirty-three phenolic compounds were quantified and identified (Table 4 and Figure 3). However, p-coumaric acid (541.49 mg/kg) and vanillic acid (62.22 mg/kg) are the main polyphenols identified in EDOA; p-coumaric acid (541.49 mg/kg) and ascorbic acid (42.93 mg/kg) are the main polyphenols in 1 mg of EDOR. It was determined that fumaric acid and p-coumaric acid are the most abundant polyphenols in both EDOA and EDOR.
The IC50 values measured for α-glycosidase were 1.098 μg/mL (r2: 0.9545) for EDOA; 0.442 μg/mL (r2: 0.9498) for EDOR; and 22.80 μM for Acarbose (Table 5) [21]. In addition, the IC50 values measured for α-amylase were 0.726 μg/mL (r2: 0.9860) for EDOA; 0.415 μg/mL (r2: 0.9747) for EDOR; and 10.01 μM for Acarbose (Table 5) Additionally, EDOA and EDOR had an efficient inhibition profile against the α-amylase as a proteolytic enzyme, with IC50 values of 0.726 (r2: 0.9860) and 0.415 μg/mL (r2: 0.9747), respectively (Table 5). It was reported that Acarbose exhibited α-glycosidase enzyme with an IC50 value of 10.01 μg/mL [22].
In the current study, the results of AD-related cholinesterase inhibition were evaluated and the IC50 values for AChE were measured to be 1.809 μg/mL (r2: 0.9722) for EDOA; 2.466 μg/mL (r2: 0.9826) for EDOR; and 0.124 μM for tacrine (Table 5) [24].
p-Coumaric acid, quercitrin, and vanillic acid were detected to be the main phenolic acid of EDOA and EDOR. However, it was reported that p-coumaric acid has been shown to have no inhibition toward AChE [25]. The best binding-pose selection was performed for quercitrin and vanillic acid, the two main compounds of EDOA and EDOR, by placing them into the active site of the AChE. Additionally, the best binding-pose selection was performed for p-coumaric acid and vanillic acid to the active site of α-amylase and α-glycosidase as other target enzymes. Docking studies were followed by analysis of binding modes to understand inhibition mechanisms. According to docking scores, quercitrin showed the highest binding affinity with AChE and p-coumaric acid showed the highest binding affinity with α-amylase and α-glycosidase enzyme targets (Table 6). Quercitrin and vanillic acid were placed in the active site of the enzyme AChE (PDB code: 4EY7). Figure 4B represents 3D and 2D interactions of Quercitrin–AChE and the docking score was calculated as −8.8 kcal/mol (Table 6). It is shown that the hydroxyl groups of quercitrin are linked to the active site through H-bond interactions with Gln-291, Arg-296, Glu-292, and Trp-286 active-site amino acids.
p-Coumaric acid-α-glycosidase (5NN8) complex’s docking score was calculated to be -6.5 kcal/mol (Table 6). A conventional H-bond of p-coumaric acid with α-glycosidase Asp-404 residue and two π anion interactions with Asp-518 and Arg-600 residues are shown in Figure 5B.
The binding affinity of p-coumaric acid-α-amylase (2QV4) complex was calculated as −5.6 kcal/mol (Table 6). p-Coumaric acid showed an H-bond with Asp-300 and Gln-63 residues in the active site of the α-amylase. Additionally, p-coumaric acid-α-amylase complex showed π-π stacked interactions with Tyr-62 residue in the active site Figure 6B.

3. Discussion

It is important to choose the most appropriate method when determining the antioxidant capacity of plants. In the present study, Fe3+ reducing, Cu2+ reducing and Fe3+-TPTZ reducing effects, ABTS and DPPH radical removal methods, and Fe2+ binding ability were used to determine the antioxidant capacity of the extract [26]. The DPPH method is based on the DPPH scavenging percentage of antioxidants in the plant extract. On the other hand, ABTS assay is based on the percentage of antioxidants in the plant extract to scavenge ABTS•+ radicals [27]. Ferrozine is known to form complexes with Fe2+ ions. In the presence of chelating agents in the environment, the generation of the complex is disrupted and leads to a decrease in the red complex color. In this way, the estimation of color reduction allows for estimating the chelating ability of the chelator [28].
Ascorbic acid was found to be the compound with the most effective DPPH scavenging activity. EDOA and EDOR were found to have a free radical scavenging ability close to standard compounds. In one study, DPPH scavenging activity of methanol extract of D. osmanica aerial parts was investigated and the IC50 value was found to be 0.1838 ± 0.0015 mg/mL [1]. In another study, DPPH scavenging activity of aqueous ethyl alcohol extract (70%) of Dactylorhiza maculata was investigated and the IC50 value was found to be 217.89 ± 10.89 mg ascorbic acid [29]. In a study conducted in 2020, extracts prepared from Dactylorhiza romana plant roots using different solvents were investigated, and the DPPH test IC50 of ethanol extract was calculated to be 1.53 ± 0.004 mg/mL [20]. When all these results were interpreted, it was determined that EDOA and EDOR did not exhibit a very strong DPPH scavenging activity. According to the ABTS•+ scavenging activity method, a stable form of the radical is produced in the experiment and forms blue-green ABTS•+ by reacting with an antioxidant, and decolorization specifies the rate of ABTS•+ inhibition [30,31].
Additionally, the results indicate that EDOA and EDOR have very strong metal chelating activity. In the literature search, there were no publications about Fe2+ chelating activity measured in D. osmanica extracts, so this study is the first. The antioxidant profile of EDOA and EDOR, characterized by using the ferric ion (Fe3+) reduction and CUPRAC and FRAP assays, are shown in Table 2 and Figure 2. Reduction capacity is an important factor in determining whether a molecule has antioxidant activity [32]. The first method used was to reduce Fe3+ to Fe2+ in Fe[(CN)6]3+ solution, which is one of the common methods. The reaction system is based on the reduction of Fe+3 in potassium ferricyanide to Fe2+ with the addition of an antioxidant agent and the formation of the Prussian blue color at 700 nm [19]. According to the results, it was determined that EDOA and EDOR have strong ability to reduce ferric ions (Fe3+) (p < 0.001) (Table 2). However, this value was found to be lower than standard antioxidants. In the CUPRAC test, the absorbance measurement of the stable complex occurred between neocuproine and Cu2+ ions, observed at 450 nm. High absorbance values indicate high reducing ability [19]. The Cu2+ ion reducing ability of EDOA, EDOR, and positive controls are demonstrated in Table 2 and Figure 2b. The FRAP assay is based on measuring the power of a sample with antioxidant properties to reduce oxidant ferric iron to ferrous form [33]. According to the method, higher absorbance values represent the higher reduction ability of the Fe3+-TPTZ complex. Furthermore, EDOA and EDOR demonstrated effective FRAP ability (p < 0.001) (Table 2). In one study, a methanol extract of aerial parts of D. osmanica was investigated and the Fe3+-TPTZ reducing value was found to be 804 ± 8.6217 (μM TE/g) [1]. Dactylorhiza chuhensis ethanol extracts were examined in a study and the FRAP values of tubers and flowers were found to be 85.3 ± 8.6 and 511.6 ± 252 µmol Fe2+/g DW, respectively [2].
The plants exhibited effective antioxidant capacity due to their secondary metabolites, including a large spectrum of phenolic and flavonoids [34]. Phenolic compounds are among the plant’s main secondary metabolites. It was determined that a diet rich in phenolic compounds has protective effects against cancer and cardiovascular diseases. Phenolic and flavonoids have many biological effects including anticancer, antibacterial, antiallergic, anti-inflammatory, and free radical scavenger [35]. Flavonoids form an important chemical class of secondary compounds in plants. Numerous phenolic hydroxyl groups attached to the ring structures of flavonoids give them antioxidant ability [36,37]. Owing to their strong free radical scavenging properties, flavonoids show antioxidant activities such as metal chelation and reduction [38]. In another study, total phenolic and flavonoid quantities in Dactylorhiza hatagirea tuber extract were found to be 11.42 ± 0.48 mg GAE/g and 11.46 ± 0.28 mg QE/g, respectively [4]. Dactylorhiza chuhensis ethanol extracts were examined in a study and the total phenolics of tubers and flowers were found to be 13.9 ± 0.6 and 44.2 ± 2.0 mg GAE/g DW, respectively [2]. In another study, the ethanol extract of Dactylorhiza romana plant roots was investigated and total phenolic and flavonoid contents were determined as 24.91 ± 0.95 mg GAE/g and 3.58 ± 0.08 QE/g, respectively [20]. The results obtained in these previous studies were found to be sometimes higher and sometimes lower than our results. The reason for this is thought to be due to differences in ecological and soil structure of the region where the plant is grown, analysis methods, solvents used, and extraction conditions.
It is known that antioxidant compounds including phenolics, flavonoids, and phenolic acids have a wide variety of pharmacological effects such as anti-inflammatory, anticarcinogenic and antiatherosclerotic activity [39]. Phenolic compounds, which have many beneficial effects on human health, are found in plants, vegetables, fruits, and cereals [40,41]. p-Coumaric acid is a hydroxyl derivative of cinnamic acid, and p-coumaric acid is one of its most abundant isomers in nature [42]. p-Coumaric acid is a natural phenolic acid found in many edible plants and exhibits various biological effectiveness as an antioxidant, antimicrobial, anti-inflammatory, and analgesic. It has also been determined to act as a tyrosinase inhibitor [42,43,44,45]. Few studies have been found to determine the phenolic content of D. osmanica. Only in 2018, a study was conducted with D. osmanica, which was collected from a different part of Turkey, and according to this, the most plentiful phenolics were determined by HPLC measurement to be syringaldehyde, p-coumaric acid, ferulic acid, synaptic acid, and benzoic acid [1]. The results of this research were found to be in agreement with the present study.
Diabetes mellitus (DM) is a metabolic disease caused by a disorder in insulin secretion. It causes chronic hyperglycemia and irregularity in carbohydrate, fat, and protein metabolism [46,47]. In the treatment of DM, compounds that inhibit the enzymes involved in carbohydrate absorption and metabolism are used, especially for the inhibition of pancreatic α-amylase and α-glucosidase enzymes, which are among the main enzymes involved in the intestinal absorption of glucose and play a key role in treatment. Inhibition of these enzymes reduces the absorption of sugars from the intestine and provides regulation of postprandial blood glucose level in Type 2-DM (T2DM) patients [48,49]. However, these drugs used for treatment have side effects. For this reason, natural compounds obtained from medicinal plants are being investigated for the treatment of T2DM, as they create better glycemic control and show fewer side effects [50]. Orchid species are among the plants widely used in traditional medicine due to their medicinal properties [48]. The determination of the inhibition of antidiabetic enzymes, α-glycosidase and α-amylase, was conducted for determination of antidiabetic capability of D. osmanica.
According to the results obtained, it was shown that ethanolic extracts of D. osmanica effectively inhibited α-amylase and α-glycosidase activities. These inhibitory effects were compared with Acarbose. In particular, EDOR had a very high affinity for α-amylase and α glycosidase. In the literature search, no data were found on the inhibitory properties of D. osmanica for α-glycosidase and α-amylase enzymes. However, there are studies carried out in different Dactylorhiza species. In a study conducted in 2020, the extracts prepared from the roots of D. romana with different solvents were investigated and the α-glucosidase and α-amylase inhibition IC50 values of the ethanol extract was determined to be 4.368 ± 0.053 and 76.554 ± 0.303 mmol/g, respectively [20]. In another study, α-glycosidase and α-amylase inhibition were investigated and the IC50 values of the methanol extract of Dactylorhiza hatagireas leaves were investigated and found to be 199.8 ± 4.7 and 210.28 ± 5.4 µg/mL, respectively [48]. In another study, α-glycosidase and α-amylase percentage inhibition values of D. hatagirea tuber extract were determined to be 46.80% and 27.97%, respectively [4]. The results of this study were consistent with the results of previous studies on the inhibition ability of different orchid species on α-amylase and α-glucosidase activities.
Alzheimer’s disease (AD) presents with memory loss and other behavioral abnormalities. In the treatment of AD, one of the most important methods is to control the level of acetylcholine by blocking the breakdown of acetylcholinesterase inhibitors [51]. AChE is an important enzyme that hydrolyzes neurotransmitter acetylcholine at cholinergic synapses in the central nervous system and peripheral nervous system [52]. Several compounds such as donepezil, galantamine, tacrine, and rivastigmine are used as AChE inhibitors in the treatment [53]. However, current AChE inhibitors have side effects and are only used to treat mild to moderate symptoms [52]. Medicinal plants are rich in different bioactive compounds including flavonoids and alkaloids, which are can be used in the treatment of some diseases including AD. Therefore, there is increasing interest in studies to obtain new drugs from plant extracts or compounds of plant origin [51,53]. It was determined that EDOA effectively inhibited AChE enzyme. In the literature search, no data were found on the inhibitory properties of D. osmanica for AChE enzyme. This work constitutes an initial reference for this. However, there are some studies carried out in several Dactylorhiza species. In a study, the extracts prepared from the roots of Dactylorhiza iberica and different solvents were investigated and AChE inhibition value of the methanol extract determined as 28.9% [51,54].
In this research study, data on the phytochemical bioactivity and properties, phenolic and flavonoid contents, antioxidant capacity, and enzyme inhibition potential of an endemic plant, D. osmanica, are presented for the first time. It was determined that D. osmanica contains a good level of phenolic and flavonoid contents and exhibits antioxidant activity close to standard compounds. In addition, it was also determined that there was a statistically significant difference between the averages of the groups. As a result of LC-HRMS analysis, it was determined that the main phenolic compounds of D. osmanica extracts are very rich in p-coumaric acid, vanillic acid, and quercitrin. Additionally, possible inhibition of D. osmanica extracts against α-glucosidase, α-amylase, and AChE enzymes was measured and it was determined that both EDOA and EDOR showed effective enzyme inhibition according to the results, which were also supported by molecular docking studies. The results obtained from this study with D. osmanica may provide a basis for studies to obtain secondary compounds of the species in pure form.

4. Materials and Methods

4.1. Chemicals

Chemicals for antioxidant ability were ordered from Sigma-Aldrich GmbH (Steinheim, Germany): α-tocopherol, neocuproine (2,9-dimethyl-1,10-phenanthroline), BHT (butylated hydroxytoluene), DPPH (1,1-diphenyl-2-picrylhydrazyl), ascorbic acid, ABTS (2,2-Azino-bis(3-ethylbenzothiazoline-6-sulfonic acid), Ferrozine (3-(2-pyridyl)-5,6-bis (4-phenyl-sulfonic acid)-1,2,4-triazine), and trichloroacetic acid (TCA).
Ascorbic acid (≥99%), chlorogenic acid (≥95%), fumaric acid (≥99%), caffeic acid (≥98%), vanillic acid (≥97%), naringin (≥90%), rutin (≥94%), syringic acid (≥95%), rosmarinic acid (≥96%), p-coumaric acid (≥98%), quercetin (≥95%), salicylic acid (≥98%), naringenin (≥95%), luteolin (95%), emodin (90%), and chrysin (≥96%) were purchased from Sigma-Aldrich. Orientin (>97%), (+)-trans-taxifolin (>97%), luteolin 7-glucoside (>97%), hyperoside (>97%), quercitrin (>97%), apigenin (>97%), hispidulin (>97%), acacetin (>97%), and hederagenin (>97%) were purchased from TRC Canada. Verbascoside (86.31%) was obtained from HWI Analytik GMBH. Luteolin-7-rutinoside (>97%) was purchased from Carbosynth Limited. Hesperidin (≥98%) was purchased from J&K. Dihydrokaempferol (>97%), isosakuranetin (>97%), and penduletin (>97%) was purchased from Phytolab. Apigenin 7-glucoside (>97%) was purchased from EDQM CS. Myricetin (>95%) was purchased from Carl Roth GmbH+Co. Nepetin (98%) was purchased from Supelco. Caffeic acid phenethyl ester (≥97%) was purchased from European Pharmacopoeia.

4.2. Plant Materials

Sahlep (Dactylorhiza osmanica var. osmanica (Klinge) P.F Hunt et Summerh) was collected from the Gevas district of Van province, south of Pınarbaşı, during June 2019 (Location: 38°16′42.1′′ N and 43°03′49.8′′ E). It was identified by Dr. Süleyman Mesut Pinar, Van Yüzüncü Yıl University, Faculty of Science, Biology Department. The voucher specimen (voucher code: MP 16425) is deposited at the Herbarium, Biology Department (VANF), Van Yüzüncü Yıl University, Faculty of Science, Van, Turkey.

4.3. Lyophilized Water Extract

The extraction procedures were performed according to the procedures previously described [55,56]. For the preparation of the ethanol extracts of D. osmanica aerial parts (EDOA) and roots (EDOR), the aerial parts and roots (each 25 g) of the shade-dried D. osmanica were first pulverized in a grinder. Then, the ground plant materials were soaked separately with 0.5 L of ethanol. The ethanol was evaporated (Heidolph Hei-VAP HL, Schwabach, Germany) and stored at −20 °C [57].

4.4. Radical Scavenging Methods

For evaluating the DPPH radical removing effect of the EDOA and EDOR, extracts and standards were prepared at different concentrations (10–30 μg/mL) and 1 mL of DPPH radicals (0.1 mM) was added to each sample tube. After 30 min of incubation, absorbance was recorded at 517 nm, as described previously [58]. To determine the ABTS radical scavenging effects of EDOA and EDOR, the method in a prior study was used [58]. For determination of ABTS+• scavenging effects of EDOA and EDOR, the previously given method was used [59,60,61]. First, 2.45 mM persulfate solution was added to 2 mM ABTS solution to generate ABTS radicals. The absorbance of the ABTS•+ radical as control sample containing a 0.1 M phosphate buffer (pH 7.4) was adjusted to 0.750 ± 0.025 nm at 734 nm. Then, one mL of ABTS•+ solution was added to different EDOA and EDOR concentrations and after 30 min incubation absorbance were recorded at 734 nm [17,62]. Metal chelating ability was measured by inhibiting the formation of Fe2+–Ferrozine complex after treatment of test material with Fe2+ [63] with minor modification [64]. Fe2+-chelating effect was determined by the absorbance of the Fe2+–Ferrozine complex at 562 nm [65]. To summarize, different concentrations of EDOA and EDOR in 0.5 mL ethanol were transferred to a 0.1 mL of FeCl2 (0.6 mM). The reaction was started by adding 0.4 mL of Ferrozine (5 mM), which prepared in ethanol. The absorbance was measured spectrophotometrically at 562 nm [66].

4.5. Reducing Activity Methods

The Fe3+ reducing effects of EDOA and EDOR were measured depending on different concentrations (10–30 μg/mL). According to this method, the reducing capacity of an active molecule can be directly measured by reduction of Fe[(CN)6]3 to Fe[(CN)6]2 [67]. As a result, the Perl–Prussian blue complex, which exhibits absorbance at 700 nm, leads to the formation of Fe4[Fe(CN)6]3 [68]. To determine the CUPRAC of EDOA and EDOR, a previous method with some changes was applied [69]. The FRAP method is based on the reduction of the TPTZ-Fe3+ complex [70].

4.6. Total Phenolic and Flavonoid Concentration

The quantity of phenolics in EDOA and EDOR was performed as described in previous studies [71,72]. The total amount of flavonoids found in EDOA and EDOR was determined as described before [73] and as given in a prior study [74].

4.7. Enzyme Inhibition Assay

The AChE enzyme inhibition properties of the extracts were determined according to a prior study [75]. The α-amylase and α-glycosidase inhibition effects of both extracts were estimated according to a method from previous studies [76,77]. The IC50 value is defined as the concentration of antioxidant compound causing 50% enzyme inhibition and was obtained from activity (%) against compound concentrations [78,79].

4.8. LC-HRMS Analysis

4.8.1. Preparation of Samples and Conditions for LC-HRMS Analysis

The phenolic contents in EDOA and EDOR were determined by LC-HRMS analysis [80,81]. LC-HRMS analyses were performed on a Thermo ORBITRAP Q-EXACTIVE mass spectrometer (Bremen, Germany) equipped with a Troyasil (Istanbul Turkiye) C18 column (150 × 3 mm i.e., 3 µm particle size) for measurements. The mobile phases A and B were composed of 1% formic acid–water and 1% formic acid–methanol, respectively. The gradient program was 0–1.00 min 50% A and 50% B, 1.01–6.00 min 100% B, and finally 6.01–10 min 50% A and 50% B [82].

4.8.2. LC-HRMS Procedure and Optimization of HPLC Methods

The final mobile phase included an acidified methyl alcohol and water gradient by the HPLC method [83]. The identification of the phenolics was made by comparing the retention times of the standard phenolics (in the purity range 95–99%; see section chemicals) and HRMS data of ILMER in Bezmialem Vakıf University. Dihydrocapsaicin (95%, purity) was used as the internal standard (IS) for LC-HRMS for reducing repeatability caused by external effects such as ionization repeatability in mass spectrometry measurements; 0.1 g/L dihydrocapsaicin (97%, Sigma-Aldrich) solution was used as the IS. The linear range of the standard solutions is given as mg/kg in Table 7. The mass parameters related to target compounds are summarized in Table 4 [82,83,84].

4.8.3. Method Validation

Validation of the LC-HRMS method was performed by using analytical standards of corresponding compounds (see Section 4.1) as the target ions (Table 7). Considering the EURACHEM/CITAC Guide [84] and purpose of the method, the validation parameters were selected as linearity, recovery, repeatability, LOD, and LOQ for the applied method. The limit of detection (LOD) of the method for each compound was determined according to the following equation: LOD or LOQ = κSDa/b, where 3 is used for LOQ and κ = 3 for LOD; SDa represents the standard deviation of the intercept and b represents the slope (Table 7) [83].

4.9. Molecular Docking Studies

The 3D version of compound chemical structures was downloaded from pubChem [84]. The 3D X-ray crystal structures of acetylcholinesterase (PDB ID: 4EY7) [85], α-glycosidase (PDB ID: 5NN8) [86] and α-amylase (PDB ID: 2QV4) [87] were downloaded from the “Protein Data Bank” website, with resolutions 2.35, 2.45, and 1.97 Å, respectively [88]. The structures of these enzymes were optimized in AutoDockTools 1.5.7 [89]. The most stable conformations and structure optimization of ligands were determined with AutoDockTools; the PDBQT file of the ligands was then prepared. The optimized enzyme and ligand structures were loaded into AutoDockTools and the same program was used for docking. The best scores of docking energy and binding interactions were analyzed with BIOVIA Discovery Studio.

4.10. Statistical Analysis

Statistical analyses employed the unpaired Student’s t-test by using the statistical program of IBM SPSS Statistics 20. The results obtained were recorded as means with their standard deviation (SD); p < 0.05 was established as the minimum significance level.

5. Conclusions

In conclusion, in this study, EDOA and EDOR demonstrated effective antioxidant ability when compared to the standards, including BHA, BHT, α-Tocopherol, and Trolox. Additionally, EDOA and EDOR showed a value close to the standard compounds in all antioxidant activity tests. The ABTS•+ scavenging test showed better results than standard compounds. Both extracts possessed a wide spectrum of biological activities and can neutralize ROS and free radicals. EDOA and EDOR can be used to prevent or delay the formation of lipid autoxidation. Additionally, EDOA and EDOR were tested against enzymes such as acetylcholinesterase, butyrylcholinesterase, and α-glycosidase, which are associated with common diseases such as diabetes, Alzheimer’s disease, and glaucoma. Finally, the results indicated that EDOA and EDOR have some biological effects, including anticholinergic and antidiabetic effects. Thus, EDOA and EDOR may provide beneficial outcomes for treatment of diseases, following approval by further clinical and in vivo studies.

Author Contributions

Methodology and investigation, H.K., A.C.G. and İ.G.; writing—original draft preparation and writing—review and editing, supervision, funding, and acquisition, S.H.A., A.C.G. and İ.G. All authors have read and agreed to the published version of the manuscript.

Funding

İlhami Gülcin is a member of the Turkish Academy of Sciences (TÜBA). He wants to express his heartfelt gratitude to the TÜBA for their financial assistance. For his support in the collection and identification of plant samples, we would like to thank Assoc. Dr. Suleyman Mesut Pınar from Van Yuzuncuyil University. In addition, Saleh Alwasel wishes to express his heartfelt gratitude to King Saud University’s Researchers Supporting Project (RSP-2022/59).

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not relevant.

Data Availability Statement

Data are provided in a publicly accessible repository.

Conflicts of Interest

The authors declare no conflict of interest.

Sample Availability

The authors do not provide samples of the substances.

References

  1. Aliyazicioğlu, R.; Korkmaz, N.; Akkaya, Ş.; Şener, S.O. Investigation of antioxidant, antimicrobial and tyrosinase inhibitory activities in aerial parts of Dactylorhiza osmanica. Fırat Med. J. 2018, 23, 50–57. [Google Scholar]
  2. Dalar, A.; Guo, Y.; Esim, N.; Bengu, A.S.; Konczak, I. Health attributes of an endemic orchid from Eastern Anatolia, Dactylorhiza chuhensis Renz&Taub.-In vitro investigations. J. Herb. Med. 2015, 5, 77–85. [Google Scholar] [CrossRef] [Green Version]
  3. Jahromi, K.H.; Pourahmad, M.; Abedi, H.A.; Karimi, M.; Kargar Jahromi, Z. Protective effects of salep against isoniazid liver toxicity in wistar rats. J. Tradit. Complement. Med. 2018, 8, 239–243. [Google Scholar] [CrossRef] [PubMed]
  4. Singh, L.; Singh, B.; Kewlani, P.; Belwal, T.; Bhatt, I.D.; Nandi, S.K.; Bisht, A.K. Process optimization and bioactive compounds quantification from Dactylorhiza hatagirea tuber for alleviating glycemic and oxidative stress. J. Appl. Res. Med. Aromat. Plant. 2022, 26, 100352. [Google Scholar] [CrossRef]
  5. Kiziltas, H.; Ekin, S.; Yildiz, D.; Pinar, S.M. Evaluation of antioxidant properties, trace element and mineral composition of Dactylorhiza umbrosa (Kar. & Kir.) Nevski (Orchidaceae). J. Instit. Sci. Technol. 2019, 9, 2148–2156. [Google Scholar] [CrossRef]
  6. Gulcin, I. Antioxidants and antioxidant methods-An updated overview. Arch. Toxicol. 2020, 94, 651–715. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  7. Baghiani, A.; Boussoualim, N.; Trabsa, H.; Aouachria, S.; Arrar, L. In vivo free radical scavenging, antihemolytic activity and antibacterial effects of Anchusa azurea extracts. Int. J. Med. Sci. 2013, 46, 1113–1118. [Google Scholar]
  8. Durmaz, L.; Erturk, A.; Akyuz, M.; Polat Kose, L.; Uc, E.M.; Bingol, Z.; Saglamtas, R.; Alwasel, S.; Gulcin, I. Screening of carbonic anhydrase, acetylcholinesterase, butyrylcholinesterase and α-glycosidase enzymes inhibition effects and antioxidant activity of coumestrol. Molecules 2022, 27, 3091. [Google Scholar] [CrossRef] [PubMed]
  9. Gulcin, I. Antioxidant activity of food constituents: An overview. Arch. Toxicol. 2012, 86, 345–391. [Google Scholar] [CrossRef]
  10. Hristo, V.N.; Iliana, I.I. 8th Conference on medicinal and aromatic plants of southeast European countries. Z. Fur Arznei-Gewurzpflanzen 2014, 19, 293–299. [Google Scholar]
  11. Gupta, D. Methods for determination of antioxidant capacity: A review. Int. J. Pharm. Sci. Res. 2015, 6, 546–566. [Google Scholar] [CrossRef]
  12. Polat Kose, L.; Gulcin, I. Evaluation of the antioxidant and antiradical properties of some phyto and mammalian lignans. Molecules 2021, 26, 7099. [Google Scholar] [CrossRef] [PubMed]
  13. Langari, S.; Salehi, E.A. Evaluation of the antioxidant capacity of different extracts of Astragalus glaucacanthus. J. Appl. Environ. Biol. Sci. 2015, 4, 14–17. [Google Scholar]
  14. Soltanian, S.; Sheikhbahaei, M.; Mirtadzadini, M.; Kalantari Khandani, B. Evaluation of anticancer, antioxidant and antibacterial properties of methanol extract of three Acantholimon Boiss. species. Avicenna J. Phytomed. 2022, 10, 641–652. [Google Scholar]
  15. Takım, K.; Yigin, A.; Koyuncu, I.; Kaya, R.; Gulcin, I. Anticancer, anticholinesterase and antidiabetic activities of Tunceli garlic (Allium tuncelianum)-Determining its phytochemical content by LC-MS/MS analysis. J. Food Meas. Charac. 2021, 15, 3323–3335. [Google Scholar] [CrossRef]
  16. Toplan, G.G.; Kurkçuoglu, M.; Göger, F.; Taskın, T.; Civas, A.; Iscan, G.; Ecevit-Genc, G.; Mat, A.; Baser, K.H.C. Phytochemical screening and biological evaluation of Salvia hydrangea Dc. ex Benth. growing in eastern Anatolia. S. Afr. J. Bot. 2020, 147, 799–807. [Google Scholar] [CrossRef]
  17. Bursal, E.; Taslimi, P.; Gören, A.; Gulcin, I. Assessments of anticholinergic, antidiabetic, antioxidant activities and phenolic content of Stachys annua. Biocat. Agric. Biotechnol. 2020, 28, 101711. [Google Scholar] [CrossRef]
  18. Bingol, Z.; Kızıltas, H.; Gören, A.C.; Polat Köse, L.; Topal, M.; Durmaz, L.; Alwasel, S.H.; Gulcin, I. Antidiabetic, anticholinergic and antioxidant activities of aerial parts of shaggy bindweed (Convulvulus betonicifolia Miller subsp.)-profiling of phenolic compounds by LC-HRMS. Heliyon 2021, 7, e06986. [Google Scholar] [CrossRef]
  19. Kiziltas, H.; Bingol, Z.; Goren, A.C.; Pınar, S.M.; Alwasel, S.H.; Gulcin, I. LC-HRMS profiling of phytochemicals, antidiabetic, anticholinergic and antioxidant activities of evaporated ethanol extract of Astragalus brachycalyx FISCHER. J. Chem. Metrol. 2021, 15, 135–151. [Google Scholar] [CrossRef]
  20. Kotiloglu, D.; Acet, T.; Ozcan, K. Phytochemical profile and biological activity of a therapeutic orchid from Anatolia: Dactylorhiza romana subsp. georgica. J. Food Meas. Charac. 2020, 14, 3310–3318. [Google Scholar] [CrossRef]
  21. Teng, H.; Chen, L.; Fang, T.; Yuan, B.; Lin, Q. Rb2 inhibits α-glucosidase and regulates glucose metabolism by activating AMPK pathways in HepG2 cells. J. Funct. Foods 2017, 28, 306–313. [Google Scholar] [CrossRef]
  22. Tao, Y.; Zhang, Y.; Cheng, Y.; Wang, Y. Rapid screening and identification of α-glucosidase inhibitors from mulberry leaves using enzyme-immobilized magnetic beads coupled with HPLC/MS and NMR. Biomed. Chromatogr. 2013, 27, 148–155. [Google Scholar] [CrossRef] [PubMed]
  23. Torres-Naranjo, M.; Suárez, A.; Gilardoni, G.; Cartuche, L.; Flores, P.; Morocho, V. Chemical constituents of Muehlenbeckia tamnifolia (Kunth) meisn (Polygonaceae) and its in vitro α-amilase and α-glucosidase inhibitory activities. Molecules 2016, 21, 1461. [Google Scholar] [CrossRef] [PubMed]
  24. Taslimi, P.; Koksal, E.; Goren, A.C.; Bursal, E.; Aras, A.; Kılıc, O.; Alwasel, S.; Gulcin, I. Anti-Alzheimer, antidiabetic and antioxidant potential of Satureja cuneifolia and analysis of its phenolic contents by LC-MS/MS. Arab. J. Chem. 2020, 13, 4528–4537. [Google Scholar] [CrossRef]
  25. Ouattara, N.; Meda, R.N.T.; Hilou, A.; Guenné, S.; Konaté, K.; Coulibaly, A.Y.; Kiendrébeogo, M.; Millogo, J.F.; Nacoulma, O.G. Anti-acetylcholinesterase and antioxidant activities and HPLC-MS analysis of polyphenol from extracts of Nelsonia canescens (Lam.) Spreng. Asian Pac. J. Trop. Dis. 2013, 3, 382–388. [Google Scholar] [CrossRef]
  26. Oztaskin, N.; Kaya, R.; Maras, A.; Sahin, E.; Gulcin, I.; Goksu, S. Synthesis and characterization of novel bromophenols: Determination of their anticholinergic, antidiabetic and antioxidant activities. Bioorg. Chem. 2019, 87, 91–102. [Google Scholar] [CrossRef]
  27. Eruygur, N.; Atas, M.; Tekin, M.; Taslimi, P.; Kocyigit, U.M.; Gulcin, I. In vitro antioxidant, antimicrobial, anticholinesterase and antidiabetic activities of Turkish endemic Achillea cucullata (Asteraceae) from ethanol extract. S. Afr. J. Bot. 2019, 120, 141–145. [Google Scholar] [CrossRef]
  28. Gulcin, I.; Buyukokuroglu, M.E.; Kufrevioglu, O.I. Metal chelating and hydrogen peroxide scavenging effects of melatonin. J. Pineal Res. 2003, 34, 278–281. [Google Scholar] [CrossRef]
  29. Sukhikh, S.; Noskova, S.; Ivanova, S.; Skrypnik, L.; Pungin, A.; Ulrikh, E.; Chupakhin, E.; Babich, O. Study of the properties of in vitro Dactylorhiza maculata (L.) Soó (Family orchidaceae) extracts. Plants 2021, 10, 1330. [Google Scholar] [CrossRef]
  30. MacDonald-Wicks, L.K.; Wood, L.G.; Garg, M.L. Methodology for the determination of biological antioxidant capacity in vitro: A review. J. Sci. Food Agric. 2006, 86, 2046–2056. [Google Scholar] [CrossRef]
  31. Maharramova, G.; Taslimi, P.; Sujayev, A.; Farzaliyev, F.; Durmaz, L.; Gulcin, I. Synthesis, characterization, antioxidant, antidiabetic, anticholinergic, and antiepileptic properties of novel N-substituted tetrahydropyrimidines based on phenylthiourea. J. Biochem. Mol. Toxicol. 2018, 32, e22221. [Google Scholar] [CrossRef] [PubMed]
  32. Cetin Cakmak, K.; Gulcin, I. Anticholinergic and antioxidant activities of usnic acid-An activity-structure insight. Toxicol. Rep. 2019, 6, 1273–1280. [Google Scholar] [CrossRef] [PubMed]
  33. Oztaskın, N.; Taslimi, P.; Maras, A.; Goksu, S.; Gulcin, I. Novel antioxidant bromophenols with acetylcholinesterase, butyrylcholinesterase and carbonic anhydrase inhibitory actions. Bioorg. Chem. 2017, 74, 104–114. [Google Scholar] [CrossRef]
  34. Cumali, K.; Hasan, Ç.O.; Zuhal, T.; Goksel, K.; Kızıl, M. Astragalus diphtherites FENZL var. diphtherites ve Astragalus gymnalopecias RECH. FIL’ in gövde ve kök kısımlarından farklı çözücüler ile elde edilen özütlerin in vitro antioksidan ve antimikrobiyal özelliklerinin belirlenmesi. KSU J. Agric. Nat. 2018, 21, 157–166. [Google Scholar] [CrossRef]
  35. Tohma, H.; Gulcin, I.; Bursal, E.; Goren, A.C.; Alwasel, S.H.; Koksal, E. Antioxidant activity and phenolic compounds of ginger (Zingiber officinale Rosc.) determined by HPLC-MS/MS. J. Food Meas. Charac. 2017, 11, 556–566. [Google Scholar] [CrossRef]
  36. Talaz, O.; Gulcin, I.; Goksu, S.; Saracoglu, N. Antioxidant activity of 5,10-dihydroindeno[1,2-b]indoles containing substituents on dihydroindeno part. Bioorg. Med. Chem. 2009, 17, 6583–6589. [Google Scholar] [CrossRef]
  37. Jun, Y.M.; Kim, E.H.; Lim, J.J.; Kim, S.H.; Kim, S.H. Variation of phenolic compounds contents in cultivated Astragalus membranaceus phenolic compounds variation of phenolic compounds contents in cultivated astragalus membranaceus. Korean J. Med. Crop. Sci. 2012, 20, 4447–4453. [Google Scholar] [CrossRef] [Green Version]
  38. Bursal, E.; Aras, A.; Dogru, M.; Kilic, O. Phenolic content, antioxidant potentials of Saponaria prostrata endemi phenolic content, antioxidant potentials of Saponaria prostrata endemic plant. Int. J. Life Sci. Biotechnol. 2021, 5, 1–8. [Google Scholar] [CrossRef]
  39. Wong, C.; Li, H.; Cheng, K.; Chen, F. A systematic survey of antioxidant activity of 30 Chinese medicinal plants using the ferric reducing antioxidant power assay. Food Chem. 2006, 97, 705–711. [Google Scholar] [CrossRef]
  40. Tohma, H.; Koksal, E.; Kilic, O.; Alan, Y.; Yılmaz, M.A.; Gulcin, I.; Bursal, E.; Alwasel, S.H. RP-HPLC/MS/MS analysis of the phenolic compounds, antioxidant and antimicrobial activities of Salvia L. species. Antioxidants 2016, 5, 38. [Google Scholar] [CrossRef] [Green Version]
  41. Boz, H. Review p-coumaric acid in cereals: Presence, antioxidant and antimicrobial effects. Int. J. Food Sci. Thecnol. 2015, 50, 2323–2328. [Google Scholar] [CrossRef]
  42. Boo, Y.C. p-Coumaric acid as an active ingredient in cosmetics: A review focusing on its antimelanogenic effects. Antioxidants 2019, 8, 275. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  43. Aldaba-Muruato, R.L.; Ventura-Juarez, J.; Perez-Hernandez, A.M.; Hernandez-Morales, A.; Munoz-Ortega, M.H.; Martinez-Hernandez, S.L.; Alvarado-Sanchez, B.; Macias-Perez, J.R. Therapeutic perspectives of p-coumaric acid: Antinecrotic, anticholestatic and antiamoebic activities. World Acad. Sci. J. 2021, 3, 1–8. [Google Scholar] [CrossRef]
  44. Ekinci Akdemir, F.N.; Albayrak, M.; Çalik, M.; Bayir, Y.; Gulcin, I. The protective effects of p-coumaric acid on acute liver and kidney damages induced by cisplatin. Biomedicines 2017, 5, 18. [Google Scholar] [CrossRef]
  45. Ekinci Akdemir, F.N.; Gulcin, I.; Gursul, C.; Alwasel, S.H.; Bayir, Y. Effect of p-coumaric acid against oxidative stress induced by cisplatin in brain tissue of rats. J. Anim. Plant Sci. 2017, 27, 1560–1564. [Google Scholar]
  46. Taslimi, P.; Aslan, H.E.; Demir, Y.; Oztaskın, N.; Maras, A.; Gulcin, I.; Beydemir, S.; Goksu, S. Diarilmethanon, bromophenols and diarilmetan compounds: Discovery of potent aldose reductase, α-amylase and α-glycosidase inhibitors as new therapeutic approach in diabetes and functional hyperglycemia. Int. J. Biol. Macromol. 2018, 119, 857–863. [Google Scholar] [CrossRef]
  47. Gulcin, I.; Taslimi, P.; Aygun, A.; Sadeghian, N.; Bastem, E.; Kufrevioglu, O.I.; Turkan, F.; Sen, F. Antidiabetic and antiparasitic potentials: Inhibition effects of some natural antioxidant compounds on α-glycosidase, α-amylase and human glutathione S-transferase enzymes. Int. J. Biol. Macromol. 2018, 119, 741–746. [Google Scholar] [CrossRef]
  48. Alsawalha, M.; Al-subaei, A.M.; Al-jindan, R.Y.; Bolla, S.R.; Sen, D.; Balakrishna, J.P.; Ravi, P.K.; Shankar, S.; Gollapalli, R.; Veeraraghavan, V.P. Antidiabetic activities of dactylorhiza hatagirea leaf extract in 3T3—L1 cell line model. Pharmacog. Mag. 2019, 15, 212–217. [Google Scholar] [CrossRef]
  49. Burmaoglu, S.; Yılmaz, A.O.; Polat, M.F.; Kaya, R.; Gulcin, I.; Algul, O. Synthesis and biological evaluation of novel tris-chalcones as potent carbonic anhydrase, acetylcholinesterase, butyrylcholinesterase, and α-glycosidase inhibitors. Bioorg. Chem. 2019, 85, 191–197. [Google Scholar] [CrossRef]
  50. Choudhury, H.; Pandey, M.; Hua, C.K.; Mun, C.S.; Jing, J.K.; Kong, L.; Ern, L.Y.; Ashraf, N.A.; Kit, S.W.; Yee, T.S.; et al. An update on natural compounds in the remedy of diabetes mellitus: A systematic review. J. Tradit. Comp. Med. 2018, 8, 361–376. [Google Scholar] [CrossRef]
  51. Abbas-mohammadi, M.; Moridi, M.; Salehi, P.; Nejad, S.; Sonboli, A.; Kelso, C.; Skropeta, D. Acetylcholinesterase-inhibitory activity of Iranian plants: Combined HPLC/bioassay-guided fractionation, molecular networking and docking strategies for the dereplication of active compounds. J. Pharm. Biomed. Anal. 2018, 158, 471–479. [Google Scholar] [CrossRef] [PubMed]
  52. Makarian, M.; Gonzalez, M.; Salvador, S.M.; Lorzadeh, S.; Hudson, P.K.; Pecic, S. Synthesis, kinetic evaluation and molecular docking studies of donepezil-based acetylcholinesterase inhibitors. J. Mol. Struct. 2022, 1247, 131425. [Google Scholar] [CrossRef] [PubMed]
  53. Burmaoglu, S.; Akın Kazancioglu, E.; Kazancioglu, M.Z.; Saglamtas, R.; Yalçın, G.; Gulcin, I.; Algül, O. Synthesis, molecular docking and some metabolic enzyme inhibition properties of biphenyl-substituted chalcone derivatives. J. Mol. Struct. 2022, 1254, 132358. [Google Scholar] [CrossRef]
  54. Kaya, Y.; Erçağ, A.; Zorlu, Y.; Demir, Y.; Gulcin, I. New Pd(II) complexes of the bisthiocarbohydrazones derived from isatin and disubstituted salicylaldehydes: Synthesis, characterization, crystal structures and inhibitory properties against some metabolic enzymes. J. Biol. Inorg. Chem. 2022, 27, 271–281. [Google Scholar] [CrossRef]
  55. Gülçin, I. The antioxidant and radical scavenging activities of black pepper (Piper nigrum) seeds. Int. J. Food Sci. Nutr. 2005, 56, 491–499. [Google Scholar] [CrossRef]
  56. Gulcin, I.; Tel, A.Z.; Kirecci, E. Antioxidant, antimicrobial, antifungal and antiradical activities of Cyclotrichium niveum (Boiss.) Manden and Scheng. Int. J. Food Propert. 2008, 11, 450–471. [Google Scholar] [CrossRef]
  57. Koksal, E.; Gulcin, I. Antioxidant activity of cauliflower (Brassica oleracea L.). Turk. J. Agric. For. 2008, 32, 65–78. [Google Scholar]
  58. Blois, M.S. Antioxidant determinations by the use of a stable free radical. Nature 1958, 26, 1199–1200. [Google Scholar] [CrossRef]
  59. Yigit, M.; Barut Celepci, D.; Taslimi, P.; Yigit, B.; Çetinkaya, B.; Özdemir, İ.; Aygün, M.; Gulçin, İ. Selenourea and thiourea derivatives of chiral and achiral enetetramines: Synthesis, characterization and enzyme inhibitory properties. Bioorg. Chem. 2022, 120, 105566. [Google Scholar] [CrossRef]
  60. Kızıltas, H.; Bingol, Z.; Goren, A.C.; Alwasel, S.H.; Gulcin, I. Anticholinergic, antidiabetic and antioxidant activities of Ferula orientalis L.-Analysis of its polyphenol contents by LC-HRMS. Rec. Nat. Prod. 2021, 15, 513–528. [Google Scholar] [CrossRef]
  61. Kiziltas, H. Determination of LC-HRMS profiling, antioxidant activity, cytotoxic effect and enzyme inhibitory properties of Satureja avromanica using in vitro and in silico methods. Process. Biochem. 2022, 116, 157–172. [Google Scholar] [CrossRef]
  62. Polat Kose, L.; Gulcin, I.; Goren, A.C.; Namiesnik, J.; Martinez-Ayala, A.L.; Gorinstein, S. LC-MS/MS analysis, antioxidant and anticholinergic properties of galanga (Alpinia officinarum Hance) rhizomes. Ind. Crops Prod. 2015, 74, 712–721. [Google Scholar] [CrossRef]
  63. Dinis, T.C.P.; Madeira, V.M.C.; Almeida, L.M. Action of phenolic derivatives (acetaminophen, salicylate, and 5-aminosalicylate) as inhibitors of membrane lipid peroxidation and as peroxyl radical scavengers. Arch. Biochem. Biophys. 1994, 315, 161–169. [Google Scholar] [CrossRef]
  64. Artunc, T.; Menzek, A.; Taslimi, P.; Gulcin, I.; Kazaz, C.; Sahin, E. Synthesis and antioxidant activities of phenol derivatives from 1,6-bis(dimethoxyphenyl)hexane-1,6-dione. Bioorg. Chem. 2020, 100, 103884. [Google Scholar] [CrossRef]
  65. Gulcin, I. Antioxidant properties of resveratrol: A structure-activity insight. Innov. Food Sci. Emerg. 2010, 11, 210–218. [Google Scholar] [CrossRef]
  66. Gulcin, I. Antioxidant activity of eugenol-a structure and activity relationship study. J. Med. Food 2011, 14, 975–985. [Google Scholar] [CrossRef]
  67. Balaydın, H.T.; Gulcin, I.; Menzek, A.; Goksu, S.; Sahin, E. Synthesis and antioxidant properties of diphenylmethane derivative bromophenols including a natural product. J. Enzym. Inhib. Med. Chem. 2010, 25, 685–695. [Google Scholar] [CrossRef]
  68. Apak, R.; Calokerinos, A.; Gorinstein, S.; Segundo, M.A.; Hibbert, D.B.; Gulcin, I.; Demirci Cekic, S.; Guclu, K.; Ozyurek, M.; Esin Çelik, S.; et al. Methods to evaluate the scavenging activity of antioxidants toward reactive oxygen and nitrogen species. Pure Appl. Chem. 2022, 94, 87–144. [Google Scholar] [CrossRef]
  69. Polat Kose, L.; Gulcin, I. Inhibition effects of some lignans on carbonic anhydrase, acetylcholinesterase and butyrylcholinesterase enzymes. Rec. Nat. Prod. 2017, 11, 558–561. [Google Scholar] [CrossRef]
  70. Kızıltas, H.; Bingol, Z.; Goren, A.C.; Polat Kose, L.; Durmaz, L.; Topal, F.; Alwasel, S.H.; Gulcin, I. LC-HRMS profiling, antidiabetic, anticholinergic and anti-oxidant activities of aerial parts of kınkor (Ferulago stelleta). Molecules 2021, 26, 2469. [Google Scholar] [CrossRef] [PubMed]
  71. Gulcin, I.; Oktay, M.; Koksal, E.; Serbetci, H.; Beydemir, S.; Kufrevioglu, Ö.I. Antioxidant and radical scavenging activities of uric acid. Asian J. Chem. 2008, 20, 2079–2090. [Google Scholar]
  72. Turkan, F.; Atalar, M.N.; Aras, A.; Gulcin, I.; Bursal, E. ICP-MS and HPLC analyses, enzyme inhibition and antioxidant potential of Achillea schischkinii Sosn. Bioorg. Chem. 2020, 94, 103333. [Google Scholar] [CrossRef]
  73. Park, C.H.; Yeo, H.J.; Baskar, T.B.; Park, Y.E.; Park, J.S.; Lee, S.Y.; Park, S.U. In vitro antioxidant and antimicrobial properties of flower, leaf, and stem extracts of Korean mint. Antioxidants 2019, 8, 75. [Google Scholar] [CrossRef] [PubMed] [Green Version]
  74. Gulcin, I.; Kufrevioglu, O.I.; Oktay, M.; Buyukokuroglu, M.E. Antioxidant, antimicrobial, antiulcer and analgesic activities of nettle (Urtica dioica L.). J. Ethnopharmacol. 2004, 90, 205–215. [Google Scholar] [CrossRef] [PubMed]
  75. Erdemir, F.; Barut Celepci, D.; Aktas, A.; Taslimi, P.; Gok, Y.; Karabıyık, H.; Gulcin, I. 2-Hydroxyethyl substituted NHC precursors: Synthesis, characterization, crystal structure and carbonic anhydrase, α-glycosidase, butyrylcholinesterase, and acetylcholinesterase inhibitory properties. J. Mol. Struc. 2018, 1155, 797–806. [Google Scholar] [CrossRef]
  76. Xiao, Z.; Storms, R.; Tsang, A. A quantitative starch-iodine method for measuring alpha-amylase and glucoamylase activities. Anal. Biochem. 2006, 351, 146–148. [Google Scholar] [CrossRef] [PubMed]
  77. Bursal, E.; Aras, A.; Kilic, O.; Taslimi, P.; Goren, A.C.; Gulcin, I. Phytochemical content, antioxidant activity and enzyme inhibition effect of Salvia eriophora Boiss. & Kotschy against acetylcholinesterase, α-amylase, butyrylcholinesterase and α-glycosidase enzymes. J. Food Biochem. 2019, 43, e12776. [Google Scholar] [CrossRef] [PubMed]
  78. Arabaci, B.; Gulcin, I.; Alwasel, S. Capsaicin: A potent inhibitor of carbonic anhydrase isoenzymes. Molecules 2014, 19, 10103–10114. [Google Scholar] [CrossRef]
  79. Gulcin, I.; Alwasel, S.H. Metal ions, metal chelators and metal chelating assay as antioxidant method. Processes 2022, 10, 132. [Google Scholar] [CrossRef]
  80. Hamad, H.O.; Alma, M.H.; Gulcin, I.; Yılmaz, M.A.; Karaogul, E. Evaluation of phenolic contents and bioactivity of root and nutgall extracts from Iraqian Quercus infectoria Olivier. Rec. Nat. Prod. 2017, 11, 205–210. [Google Scholar]
  81. Han, H.; Yılmaz, H.; Gulcin, I. Antioxidant activity of flaxseed (Linum usitatissimum L.) shell and analysis of its polyphenol contents by LC-MS/MS. Rec. Nat. Prod. 2018, 12, 397–402. [Google Scholar] [CrossRef]
  82. Gulcin, I.; Topal, F.; Cakmakcı, R.; Goren, A.C.; Bilsel, M.; Erdogan, U. Pomological features, nutritional quality, polyphenol content analysis and antioxidant properties of domesticated and three wild ecotype forms of raspberries (Rubus idaeus L.). J. Food Sci. 2011, 76, C585–C593. [Google Scholar] [CrossRef]
  83. Gulcin, I.; Goren, A.C.; Taslimi, P.; Alwasel, S.H.; Kilic, O.; Bursal, E. Anticholinergic, antidiabetic and antioxidant activities of Anatolian pennyroyal (Mentha pulegium)-Analysis of its polyphenol contents by LC-MS/MS. Biocat. Agric. Biotechnol. 2020, 23, 101441. [Google Scholar] [CrossRef]
  84. Kim, S.; Chen, J.; Cheng, T.; Gindulyte, A.; He, J.; He, S.; Li, Q.; Shoemaker, B.A.; Thiessen, P.A.; Yu, B.; et al. PubChem in 2021: New data content and improved web interfaces. Nucleic Acids Res. 2021, 49, D1388–D1395. [Google Scholar] [CrossRef]
  85. Cheung, J.; Rudolph, M.J.; Burshteyn, F.; Cassidy, M.S.; Gary, E.N.; Love, J.; Franklin, M.C.; Height, J.J. Structures of human acetylcholinesterase in complex with pharmacologically important ligands. J. Med. Chem. 2012, 55, 10282–10286. [Google Scholar] [CrossRef]
  86. Roig-Zamboni, V.; Cobucci-Ponzano, B.; Iacono, R.; Ferrara, M.C.; Germany, S.; Bourne, Y.; Parenti, G.; Moracci, M.; Sulzenbacher, G. Structure of human lysosomal acid α-glucosidase-A guide for the treatment of Pompe disease. Nature Commun. 2017, 8, 1111. [Google Scholar] [CrossRef] [Green Version]
  87. Maurus, R.; Begum, A.; Williams, L.K.; Fredriksen, J.R.; Zhang, R.; Withers, S.G.; Brayer, G.D. Alternative catalytic anions differentially modulate human α-amylase activity and specificity. Biochemistry 2008, 47, 3332–3344. [Google Scholar] [CrossRef]
  88. Berman, H.M.; Battistuz, T.; Bhat, T.N.; Bluhm, W.F.; Bourne, P.E.; Burkhardt, K.; Feng, Z.; Gilliland, G.L.; Iype, L.; Jain, S.; et al. The protein data bank. Acta Crystallogr. D 2002, 58, 899–907. [Google Scholar] [CrossRef]
  89. Trott, O.; Olson, A.J. Software news and updates gabedit-A graphical user interface for computational chemistry softwares. J. Comp. Chem. 2009, 31, 456–461. [Google Scholar] [CrossRef]
Figure 1. Radical scavenging ability of ethanol extracts of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards: (a) DPPH assay; (b) ABTS scavenging; (c) Fe2+ chelating.
Figure 1. Radical scavenging ability of ethanol extracts of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards: (a) DPPH assay; (b) ABTS scavenging; (c) Fe2+ chelating.
Molecules 27 06907 g001aMolecules 27 06907 g001b
Figure 2. The reducing abilities of ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards: (a) Fe3+ reducing ability; (b) Cu2+ reducing ability; (c) FRAP reducing ability.
Figure 2. The reducing abilities of ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards: (a) Fe3+ reducing ability; (b) Cu2+ reducing ability; (c) FRAP reducing ability.
Molecules 27 06907 g002aMolecules 27 06907 g002b
Figure 3. LC-MS/MS chromatograms of EDOA (A) and EDOR (B) from sahlep (D. osmanica) (EDOA: ethanol extract of D. osmanica aerial parts, EDOR: ethanol extract of D. osmanica roots).
Figure 3. LC-MS/MS chromatograms of EDOA (A) and EDOR (B) from sahlep (D. osmanica) (EDOA: ethanol extract of D. osmanica aerial parts, EDOR: ethanol extract of D. osmanica roots).
Molecules 27 06907 g003
Figure 4. The 2D and 3D interaction profiles and best interaction poses of major phenolic compounds placed into the AChE (4EY7) by docking study: (A) Vanillic acid–AChE; (B) Quercitrin–AChE.
Figure 4. The 2D and 3D interaction profiles and best interaction poses of major phenolic compounds placed into the AChE (4EY7) by docking study: (A) Vanillic acid–AChE; (B) Quercitrin–AChE.
Molecules 27 06907 g004
Figure 5. The 2D and 3D interaction profiles and best interaction poses of major phenolic compounds placed into the α-glycosidase (5NN8) by docking study: (A) Vanillic acid–α-glycosidase; (B) p-Coumaric acid–α-glycosidase.
Figure 5. The 2D and 3D interaction profiles and best interaction poses of major phenolic compounds placed into the α-glycosidase (5NN8) by docking study: (A) Vanillic acid–α-glycosidase; (B) p-Coumaric acid–α-glycosidase.
Molecules 27 06907 g005
Figure 6. The 2D and 3D interaction profiles and best interaction poses of major phenolic compounds placed into the α-amylase enzyme (2QV4) by docking study: (A) Vanillic acid–α-amylase; (B) p-Coumaric acid–α-amylase.
Figure 6. The 2D and 3D interaction profiles and best interaction poses of major phenolic compounds placed into the α-amylase enzyme (2QV4) by docking study: (A) Vanillic acid–α-amylase; (B) p-Coumaric acid–α-amylase.
Molecules 27 06907 g006
Table 1. The half maximal concentrations (IC50; μg/mL) for ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards.
Table 1. The half maximal concentrations (IC50; μg/mL) for ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards.
CompoundsDPPH ScavengingABTS ScavengingFe2+ Chelating
IC50r2IC50r2IC50r2
Ascorbic acid16.12 ± 0.0030.956623.10 ± 0.0010.999899.0 ± 0.0360.9985
α-Tocopherol23.10 ± 0.0320.982515.40 ± 0.0030.9866330.0 ± 0.0170.9109
BHT31.50 ± 0.0110.975426.65 ± 0.0080.971714.75 ± 0.0560.9646
EDOA86.63 ± 0.0100.989410.19 ± 0.0020.98195.63 ± 0.0330.9294
EDOR115.50 ± 0.0110.979419.80 ± 0.0130.956446.20 ± 0.0150.9000
Table 2. The reducing abilities of ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards.
Table 2. The reducing abilities of ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica) and standards.
CompoundsFe3+ Reducing *Cu2+ Reducing *Fe3+-TPTZ Reducing *
λ700r2λ450r2λ593r2
Ascorbic acid (a)1.52 ± 0.028 b,c,d,e0.99701.07 ± 0.007 b,d,e0.97221.62 ± 0.015 b,d,e0.9930
α-Tocopherol (b)0.99 ± 0.007 e0.99420.79 ± 0.061 d,e0.99860.76 ± 0.075 d,e0.9867
BHT (c)1.27 ± 0.005 b,d,e0.98801.56 ± 0.089 a,b,d,e0.99780.91 ± 0.006 a,b,d,e0.9874
EDOA (d)0.99 ± 0.003 b,e0.95530.67 ± 0.0190.97470.52 ± 0.0050.9722
EDOR (e)0.83 ± 0.0310.94230.72 ± 0.022 d0.97070.45 ± 0.006 d0.9673
* Different letters in the same column show significant difference between the means (p < 0.001 regarded as significant).
Table 3. The total phenolic (μgGAE/mL extract) and flavonoid (μgQE/mL extract) contents of ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica).
Table 3. The total phenolic (μgGAE/mL extract) and flavonoid (μgQE/mL extract) contents of ethanol extract of aerial parts (EDOA) and roots (EDOR) of sahlep (D. osmanica).
ExtractsTotal PhenolicsTotal Flavonoids
EDOA12.73 ± 1.2917.54 ± 1.85
EDOR9.09 ± 0.643.28 ± 0.12
Table 4. The quantity of phenolics (mg/kg extract) in ethanol extract of D. osmanica aerial parts (EDOA) and roots (EDOR) determined by LC-HRMS.
Table 4. The quantity of phenolics (mg/kg extract) in ethanol extract of D. osmanica aerial parts (EDOA) and roots (EDOR) determined by LC-HRMS.
CompoundsEDOAEDOR
Ascorbic acid30.6242.93
Chlorogenic acid7.313.21
Fumaric acid1542.92822.95
Verbascoside 0.951.61
Orientin0.155.78
Caffeic acid14.7213.16
(+)-trans taxifolin<LOD<LOD
Luteolin-7-rutinoside0.53<LOD
Vanillic acid62.2216.56
Naringin<LOD0.00
Luteolin 7-glucoside<LOD1.02
p-Coumaric acid541.49559.22
Hesperidin0.290.39
Rutine 3.872.97
Rosmarinic acid3.0821.11
Hyperoside18.2616.05
Dihydrokaempferol0.440.20
Apigenin 7-glucoside <LOD0.03
Quercitrin29.316.05
Myricetin<LOD<LOD
Quercetin0.951.11
Salicylic acid<LOD<LOD
Naringenin8.633.32
Luteolin1.111.41
Nepetin0.69<LOD
Apigenin0.710.35
Hispidulin4.494.46
Isosakuranetin<LOD<LOD
Penduletin<LOD0.59
Caffeic acid phenethyl ester1.770.15
Chrysin5.571.26
Acacetin4.59<LOD
Emodin<LOD0.02
Table 5. The enzyme inhibition (IC50, μg/mL) of EDOA and EDOR against α-amylase, α-glycosidase, and acetylcholinesterase.
Table 5. The enzyme inhibition (IC50, μg/mL) of EDOA and EDOR against α-amylase, α-glycosidase, and acetylcholinesterase.
EnzymesEDOAEDORStandards
IC50r2IC50r2IC50
α-Glycosidase a1.0980.95450.4420.949822.80
α-Amylase a0.7260.98600.4150.974710.01
Acetylcholinesterase b1.8090.97222.4660.98260.124
a Acarbose (ACR) had been used as positive inhibitor for α-glycosidase and α-amylase and taken from references [21,23], respectively. b Tacrine was used as positive control for AChE and taken from reference [24].
Table 6. Molecular interactions of the AChE, α-amylase, and α-glycosidase with the major phenolic compounds of Dactylorhiza osmanica (vanillic acid, p-coumaric acid, and quercitrin).
Table 6. Molecular interactions of the AChE, α-amylase, and α-glycosidase with the major phenolic compounds of Dactylorhiza osmanica (vanillic acid, p-coumaric acid, and quercitrin).
ComplexDocking Scores (kcal/mol)Types of InteractionsInteracting Residues
AChE(4EY7)–Vanillic acid−6.8H-bonding
π-π stacked
π alkyl
Tyr-133, Gly-121
Trp-86
Tyr-124, Trp-86
AChE(4EY7)–Quercitrin−8.8H-bonding
C-H bonding
π-π stacked
Gln-291, Arg-296,
Glu-292,
Trp-286
α-Glycosidase (5NN8)–Vanillic acid−5.6H-bonding
π alkyl
π anion
Asp-616, Asp-404, His-674
Trp-516, Trp-613, Phe-649, His-674, Asp-518
α-Glycosidase (5NN8)–p-Coumaric acid−6.5H-bonding
π anion
Asp-404,
Asp-518, Arg-600
α-Amylase (2QV4)–Vanillic acid−5.6H-bonding
π-π stacked, π anion
π alkyl
Arg-195, His-299
Tyr-62, Asp-197
Ala-198, Leu-162
α-Amylase (2QV4)–p-Coumaric acid−5.6H-bonding
π-π stacked
Asp-300, Gln-63
Tyr-62
Table 7. Validation and uncertainty parameters for phenolic compounds.
Table 7. Validation and uncertainty parameters for phenolic compounds.
CompoundMolecular Formulam/zIonization ModeLinear RangeLinear Regression EquationLOD/LOQ
Ascorbic acidC6H8O6175.0248Negative0.5–10y = 0.00347x − 0.001370.39/1.290.9988
Chlorogenic acidC16H18O9353.0878Negative0.05–10y = 0.00817x + 0.0001630.02/0.060.9994
Fumaric acidC4H4O4115.0037Negative0.1–10y = 0.00061x − 0.00003290.05/0.170.9991
VerbascosideC29H36O15623.1981Negative0.1–10y = 0.00758x + 0.0005630.03/0.10.9995
OrientinC21H20O11447.0933Negative0.1–10y = 0.00757x + 0.0003470.01/0.030.999
Caffeic acidC9H8O4179.0350Negative0.3–10y = 0.0304x + 0.003660.08/0.270.9993
(+)-trans taxifolinC15H12O7303.0510Negative0.3–10y = 0.0289x + 0.005370.01/0.030.9978
Luteolin-7-rutinosideC27H30O15593.1512Negative0.1–10y = 0.00879x + 0.0007390.01/0.030.9988
Vanillic acidC8H8O4167.0350Negative0.3–10y = 0.00133x + 0.00034560.1/0.330.9997
NaringinC27H32O14579.1719Negative0.05–10y = 0.00576x − 0.0002840.01/0.030.999
Luteolin 7-glycosideC21H20O11447.0933Negative0.1–7y = 0.0162x + 0.002260.01/0.030.9961
p-Coumaric acidC9H8O3163.0401Negative1 + 10y = 0.000324x − 0.00006410.32/1.020.9988
HesperidinC28H34O15609.1825Negative0.05–10y = 0.00423x + 0.00001380.01/0.030.999
Rutin C27H30O16609.1461Negative0.05–10y = 0.00329x − 0.000055760.01/0.030.999
Rosmarinic acidC18H16O8359.0772Negative0.05–10y = 0.00717x − 0.00030670.01/0.030.999
HyperosideC21H20O12463.0882Negative0.05–10y = 0.0072x − 0.000030960.01/0.031.000
DihydrokaempferolC15H12O6287.0561Negative0.3–7y = 0.0756x + 0.01180.01/0.030.995
Apigenin 7-glucosideC21H20O10431.0984Negative0.3–7y = 0.0246x + 0.003060.01/0.030.996
QuercitrinC21H20O11447.0933Negative0.05–10y = 0.0179 + 0.00033310.01/0.030.999
MyricetinC15H10O8317.0303Negative0.1–10y = 0.0202x + 0.001650.01/0.030.9993
QuercetinC15H10O7301.0354Negative0.1–10y = 0.0509x + 0.004670.01/0.030.9978
Salicylic acidC7H6O3137.0244Negative0.3–10y = 0.0361x + 0.002450.01/0.030.9982
NaringeninC15H12O5271.0612Negative0.1–10y = 0.0281x + 0.001820.01/0.030.9995
LuteolinC15H10O6285.0405Negative0.1–10y = 0.117x + 0.008480.01/0.030.998
NepetinC16H12O7315.0510Negative0.05–10y = 0.0853x + 0.002690.01/0.030.9992
ApigeninC15H10O5269.0456Negative0.3–10y = 0.104x + 0.01990.01/0.030.9998
HispidulinC16H12O6301.0707Positive0.05–10y = 0.02614x + 0.00031140.01/0.030.9993
IsosakuranetinC16H14O5285.0769Negative0.05–10y = 0.0235x + 0.0005610.01/0.030.999
PenduletinC18H16O7343.0823Negative0.3–10y = 0.0258x + 0.002530.01/0.030.999
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Kiziltas, H.; Goren, A.C.; Alwasel, S.H.; Gulcin, İ. Sahlep (Dactylorhiza osmanica): Phytochemical Analyses by LC-HRMS, Molecular Docking, Antioxidant Activity, and Enzyme Inhibition Profiles. Molecules 2022, 27, 6907. https://0-doi-org.brum.beds.ac.uk/10.3390/molecules27206907

AMA Style

Kiziltas H, Goren AC, Alwasel SH, Gulcin İ. Sahlep (Dactylorhiza osmanica): Phytochemical Analyses by LC-HRMS, Molecular Docking, Antioxidant Activity, and Enzyme Inhibition Profiles. Molecules. 2022; 27(20):6907. https://0-doi-org.brum.beds.ac.uk/10.3390/molecules27206907

Chicago/Turabian Style

Kiziltas, Hatice, Ahmet Ceyhan Goren, Saleh H. Alwasel, and İlhami Gulcin. 2022. "Sahlep (Dactylorhiza osmanica): Phytochemical Analyses by LC-HRMS, Molecular Docking, Antioxidant Activity, and Enzyme Inhibition Profiles" Molecules 27, no. 20: 6907. https://0-doi-org.brum.beds.ac.uk/10.3390/molecules27206907

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